DRSC/TRiP Functional Genomics Resources

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Protein Alignment chinmo and Btbd18

DIOPT Version :10

Sequence 1:NP_722717.2 Gene:chinmo / 33343 FlyBaseID:FBgn0086758 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001138572.1 Gene:Btbd18 / 100270744 MGIID:3650217 Length:723 Species:Mus musculus


Alignment Length:505 Identity:107/505 - (21%)
Similarity:166/505 - (32%) Gaps:153/505 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LAITFSNLF---KSDLLADVILSCDGVVFKAHKLILAACSKKFADLFE-NTPTNGQCVII----L 74
            |.:.|..|.   :|.:..|.:|..:|....||..||:|||..|.:..| ..|..|:.|::    |
Mouse    17 LRVAFLQLHHQQQSGVFCDALLQAEGEAVPAHCCILSACSPFFTERLERERPVQGRKVVLEMGGL 81

  Fly    75 EATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLST---ETGRLAAQQAQQHMGDLS 136
            :..|   :..|::|:|..|:.||||.....|.:|..|:|..|.|   |.|:|             
Mouse    82 KIQT---LRKLVDFLYTSEMEVSQEEAQDVLSAARQLRVSELETLQLEGGKL------------- 130

  Fly   137 PLDSPTGRRSVRNSLSGGSSSIVPGGVGIGLGGGATGANSM-----------SGMGIGNGLSLAG 190
             :.:|.|||..|..|...:::.:...|        .|..|.           |.:|.....||..
Mouse   131 -VKAPQGRRLNRECLQPPAAAPISARV--------VGPKSRPQTPLPVTQTPSPLGAVRLKSLGE 186

  Fly   191 MAAGGGMAAAANAAASSLSTLAASANIVDRCGSAGANIISGSAAGIGGSHSGGAGNGSGTVGIGG 255
            ...........||.:.|.:.|...|.:   |      :...|.:.......|.....|       
Mouse   187 EEGAHKKTNLPNADSLSDTQLKKKARV---C------LTQESRSSPSSQREGPKETKS------- 235

  Fly   256 NGVGSGGGNNGPISLG-----------------SGAGAAHHLGGST--GILKQECDSLMHPGG-- 299
                    |.||.:|.                 |.:..:.|:..||  .||.........||.  
Mouse   236 --------NPGPTALPSLYPSVDEQLLPRKIRLSRSKPSPHVYTSTPSSILSGPSSMPTAPGRRL 292

  Fly   300 ------SSSSSGMGYTHVPPIYRPINYEP-----------PRKRAIVRSPYSEQEQRGSVLRDGS 347
                  |..:.|:. ...|...||:...|           .::...:|:|.|...:.|.|.|...
Mouse   293 WRQRTVSKEAQGVD-KQKPGEVRPLQSTPDPSDVGKPAENKKQSPELRAPTSSSVEEGQVGRVKL 356

  Fly   348 K---SSECPSPINKPPYHRPSSSASSTAPTEAD----TMHSE-------------RASPQSSRYE 392
            :   :..|...:.:||......|.....|::.:    |:.|.             :.||:|.|.:
Mouse   357 RKIVNGTCWEVVQEPPLRNTQDSPQILEPSDVEEPSGTLLSSVNEQEIPARIQLCQDSPESPRLQ 421

  Fly   393 ------NHSPSTTAGNGNATSSLERIVKSERNN-----GSANEANDDDRE 431
                  :|||.            ..:||||..:     |..::.|.|.||
Mouse   422 DILLSASHSPD------------HPMVKSEFGSSPMLTGKESDLNIDCRE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chinmoNP_722717.2 BTB_POZ_BAB-like 31..115 CDD:349624 29/88 (33%)
C2H2 Zn finger 519..540 CDD:275368
C2H2 Zn finger 547..568 CDD:275368
Btbd18NP_001138572.1 BTB_POZ_BTBD18 20..138 CDD:349602 39/134 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..176 4/33 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..350 30/186 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..394 4/23 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..637
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..723
Blue background indicates that the domain is not in the aligned region.

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