DRSC/TRiP Functional Genomics Resources

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Protein Alignment haf and Lrrc15

DIOPT Version :10

Sequence 1:NP_001356954.1 Gene:haf / 33339 FlyBaseID:FBgn0261509 Length:1347 Species:Drosophila melanogaster
Sequence 2:NP_083249.1 Gene:Lrrc15 / 74488 MGIID:1921738 Length:579 Species:Mus musculus


Alignment Length:504 Identity:134/504 - (26%)
Similarity:199/504 - (39%) Gaps:71/504 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRPGRTTTALPAATTPLLLLLPLILGRLHVAHAQCPWQRDVPDLQTSCICAYNLGRELSVQCDQV 65
            |........:|.|...|..|..|.|....:.:......:||.:|:|..:....|     ||....
Mouse    84 MEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQL-----VQIQPA 143

  Fly    66 DFSQLLAAMNTHARLKPVDLLYVNNSTISELPDAVFSNL-SLHNLQLSSCGIQRIATGAFK--GQ 127
            .|||.       :.||.:. ||.||  :..:|:.||.:| .|..|.|.:.|...::...|:  |.
Mouse   144 QFSQF-------SNLKELQ-LYGNN--LEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGN 198

  Fly   128 ESVLRNLNLQDNLLADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNNVT-L 191
            ..|||   |.:|.|:|:|:.....||.|..|.|.:||:..:....|.....|..|.|::|::: |
Mouse   199 LQVLR---LYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHL 260

  Fly   192 ASNAFRGLEQSLKNLNLKGTKQRKVPESIRG-LKSLAFLDLSQNGIKELPGAGGIRVFDGLDALT 255
            ....|..|.. |..|.|.|...:::...:.| :.:|..|.|..|.|..||.    ..|..|:.|.
Mouse   261 PPGIFMQLPH-LNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPD----NAFSHLNQLQ 320

  Fly   256 ALNLERNLIQSIGETAFAGVRKTLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPEAA 320
            .|.|..|.:..|...||.|: ..|..|||..|.|.:.......||..||.:.:..|.|..||.:.
Mouse   321 VLILSHNQLSYISPGAFNGL-TNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSI 384

  Fly   321 FRGNPGITLLALDGNPLSSVPEGAFAHLNATLRGLSLGGRFLHCDCKLRWVAEWIRNGDLQVTSR 385
            |....|:..:.|..|.|.::|.|.|.|| ..|..|.|......||..:..:.:|:      :.:|
Mouse   385 FANVNGLMTIQLQNNNLENLPLGIFDHL-GNLCELRLYDNPWRCDSNILPLHDWL------ILNR 442

  Fly   386 ER----NPQFCGTPPRFRDRGFYSIQPEELSCPDIADAALRGPVGLADNLKPTLPSSPDSVEYET 446
            .|    ....|.:|...|.:....|.      .:....:::||.      .|.:.|.||:..|  
Mouse   443 ARLGTDTLPVCSSPASVRGQSLVIIN------VNFPGPSVQGPE------TPEVSSYPDTSSY-- 493

  Fly   447 GTGTGTVGTGTAASAPVTSSVSSSTSTTTPTTT--TTTTTAEPTTRRST 493
                           |.::|:||:|..|..|..  |...|.||...|:|
Mouse   494 ---------------PDSTSISSTTEITRSTDDDYTDLNTIEPIDDRNT 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hafNP_001356954.1 leucine-rich repeat 86..105 CDD:275380 8/19 (42%)
LRR 103..>344 CDD:443914 72/245 (29%)
leucine-rich repeat 106..129 CDD:275380 6/24 (25%)
leucine-rich repeat 131..154 CDD:275380 8/22 (36%)
leucine-rich repeat 155..178 CDD:275380 6/22 (27%)
leucine-rich repeat 179..202 CDD:275380 7/23 (30%)
leucine-rich repeat 203..225 CDD:275380 5/22 (23%)
leucine-rich repeat 226..253 CDD:275380 9/26 (35%)
leucine-rich repeat 254..302 CDD:275380 16/47 (34%)
leucine-rich repeat 303..326 CDD:275380 7/22 (32%)
leucine-rich repeat 327..350 CDD:275380 8/22 (36%)
PCC 332..>413 CDD:188093 20/84 (24%)
PRK10927 <1061..>1097 CDD:236797
Lrrc15NP_083249.1 LRR_8 54..113 CDD:404697 7/28 (25%)
LRR 1 54..75
leucine-rich repeat 58..78 CDD:275380
LRR 2 78..99 3/14 (21%)
LRR 3 102..123 3/20 (15%)
LRR 103..>441 CDD:443914 104/368 (28%)
leucine-rich repeat 103..126 CDD:275380 5/22 (23%)
LRR 4 126..147 6/25 (24%)
leucine-rich repeat 127..150 CDD:275380 8/34 (24%)
LRR 5 150..171 9/23 (39%)
leucine-rich repeat 151..174 CDD:275380 10/25 (40%)
LRR 6 174..195 5/20 (25%)
leucine-rich repeat 175..198 CDD:275380 5/22 (23%)
LRR 7 198..219 8/23 (35%)
leucine-rich repeat 199..222 CDD:275380 9/25 (36%)
LRR 8 222..243 6/20 (30%)
leucine-rich repeat 223..246 CDD:275380 6/22 (27%)
LRR 9 246..267 6/20 (30%)
leucine-rich repeat 247..270 CDD:275380 7/22 (32%)
LRR 10 270..291 4/21 (19%)
leucine-rich repeat 271..294 CDD:275380 5/22 (23%)
LRR 11 294..315 8/24 (33%)
leucine-rich repeat 295..318 CDD:275380 9/26 (35%)
LRR 12 318..339 7/20 (35%)
leucine-rich repeat 319..342 CDD:275380 8/23 (35%)
LRR 13 342..363 6/20 (30%)
leucine-rich repeat 343..364 CDD:275380 6/20 (30%)
LRR 14 366..387 7/20 (35%)
leucine-rich repeat 367..387 CDD:275380 7/19 (37%)
LRR 15 390..411 7/20 (35%)
leucine-rich repeat 391..412 CDD:275380 6/20 (30%)
LRRCT 423..>462 CDD:214507 8/44 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..509 13/55 (24%)
Blue background indicates that the domain is not in the aligned region.

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