DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment haf and ISLR2

DIOPT Version :9

Sequence 1:NP_001356954.1 Gene:haf / 33339 FlyBaseID:FBgn0261509 Length:1347 Species:Drosophila melanogaster
Sequence 2:NP_001123608.1 Gene:ISLR2 / 57611 HGNCID:29286 Length:745 Species:Homo sapiens


Alignment Length:794 Identity:160/794 - (20%)
Similarity:245/794 - (30%) Gaps:260/794 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 RKVPESIRGLKSLAFLDLSQNGIKEL-PGAGGIRVFDGLDALTALNLERNLIQSIGETAFAGVRK 277
            |:|||.:..  ::..|.||.|.|..| .||     |..:..:|:|.|..|.::::...|.| |..
Human    43 REVPEGLPA--NVTTLSLSANKITVLRRGA-----FADVTQVTSLWLAHNEVRTVEPGALA-VLS 99

  Fly   278 TLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPEAAFRGNPGITLLALDGNPLSSVPE 342
            .|.:|.|.:|.::.||...:.:|..|::|.:..|.|.|||..|....|.:..|.::.|.|.::..
Human   100 QLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAP 164

  Fly   343 GAFAHLNATLRGLSLGGRFLHCDCKLRWVAEWIRNGDLQVTSRERNPQFCGTPPRFRDRGFYSIQ 407
            |.|..|:| |..|.|.....||.|.|.|:..|.  ...:|:..|.:...|.:||..:....|.:.
Human   165 GTFDALSA-LSHLQLYHNPFHCGCGLVWLQAWA--ASTRVSLPEPDSIACASPPALQGVPVYRLP 226

  Fly   408 PEELSCPDI---ADAALRGP-----VGLADNL--------------------------KPTLPSS 438
            ....:.|.:   |:..|..|     .|||..|                          .|.|...
Human   227 ALPCAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGTVVLEPPVLSGE 291

  Fly   439 PDSV--EYETGTGTGTVGTGTAASAPV-------------------------------------- 463
            .|.|  |...|.|.|.:.|.|.|..|.                                      
Human   292 DDGVGAEEGEGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEAGVYTCR 356

  Fly   464 --------TSSVSSSTSTTTPTTTTTTTTAEPTTRRSTTRPPTKSTTTISATTASPASNP--PVN 518
                    ::|:..:.:.|.|.........||..:..|:.  .|||......:..| |.|  .:.
Human   357 AHNELGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSE--RKSTAKGRGNSVLP-SKPEGKIK 418

  Fly   519 GTGTVQATSITTSSSSSSSSSTSTGHGNGKQA---PGWRQGVTNGNGN----------------- 563
            |.|..: .||...:.:.....||.|.....|.   |...|...||:.:                 
Human   419 GQGLAK-VSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELKPH 482

  Fly   564 ----------------------------SGVGGAGGLHKPQRPPLVLGYPPQRGTRIDDANEVQV 600
                                        .|.|||||..:|.|.||.|.|....|           
Human   483 VFELGVIALDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAG----------- 536

  Fly   601 KHAFRQDSSVIIQWD--SDTANILGFRVVYRLFGEKAFKQGPPLESSEREFKIKNVPAQECIIVC 663
                   ....:||.  .:..|...||.:.                          |.....:..
Human   537 -------GGAAVQWSRVEEGVNAYWFRGLR--------------------------PGTNYSVCL 568

  Fly   664 VISLEELHVTPETVPYQQCREVRTVASQASNMDKITIAASAAICGTIIVAVIVFIAASRRSRKLQ 728
            .::.|..|             |:.|.|....:..:          .:||||.||:........|.
Human   569 ALAGEACH-------------VQVVFSTKKELPSL----------LVIVAVSVFLLVLATVPLLG 610

  Fly   729 SS----QQKSPLPIGGLPVNCCGPTGSPGPLGS-IATLSAFNNHKEWDQVSAYSGRSIPRPRIYP 788
            ::    ..|.|    |.|........:|.|:.. ||.        ::|..::|    :...:.||
Human   611 AACCHLLAKHP----GKPYRLILRPQAPDPMEKRIAA--------DFDPRASY----LESEKSYP 659

  Fly   789 V------EQPDDMRSHFSGMPGKVGKSRSLADGQSQHSFSNNSHRGYLGSAFPSNLVNSRPELRQ 847
            .      |:|:|::.  .|:.....:.....|.|.:.|.:            ..:||.|:.:..|
Human   660 AGGEAGGEEPEDVQG--EGLDEDAEQGDPSGDLQREESLA------------ACSLVESQSKANQ 710

  Fly   848 SRQSLAAASERMSR 861
              :...|.||...|
Human   711 --EEFEAGSEYSDR 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hafNP_001356954.1 LRR <52..>252 CDD:227223 13/38 (34%)
leucine-rich repeat 86..105 CDD:275380
leucine-rich repeat 106..129 CDD:275380
LRR_8 131..189 CDD:338972
leucine-rich repeat 131..154 CDD:275380
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..202 CDD:275380
leucine-rich repeat 203..225 CDD:275380 4/10 (40%)
leucine-rich repeat 226..253 CDD:275380 9/27 (33%)
LRR_8 254..337 CDD:338972 25/82 (30%)
leucine-rich repeat 254..302 CDD:275380 14/47 (30%)
leucine-rich repeat 303..326 CDD:275380 8/22 (36%)
leucine-rich repeat 327..350 CDD:275380 6/22 (27%)
PCC 332..>413 CDD:188093 21/80 (26%)
PRK10927 <1061..>1097 CDD:236797
ISLR2NP_001123608.1 leucine-rich repeat 36..52 CDD:275380 4/10 (40%)
LRR_8 52..109 CDD:404697 19/62 (31%)
LRR 1 52..73 9/25 (36%)
leucine-rich repeat 53..76 CDD:275380 9/27 (33%)
LRR 2 76..97 6/21 (29%)
leucine-rich repeat 77..100 CDD:275380 7/23 (30%)
LRR_8 99..159 CDD:404697 18/59 (31%)
LRR 3 100..123 6/22 (27%)
leucine-rich repeat 101..124 CDD:275380 7/22 (32%)
LRR 4 124..145 8/20 (40%)
leucine-rich repeat 125..148 CDD:275380 8/22 (36%)
LRR 5 148..169 5/20 (25%)
leucine-rich repeat 149..172 CDD:275380 6/22 (27%)
PCC 154..>228 CDD:188093 21/76 (28%)
Ig_3 232..359 CDD:404760 20/126 (16%)
Ig strand B 256..263 CDD:409353 1/6 (17%)
Ig strand C 269..274 CDD:409353 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..326 11/38 (29%)
Ig strand C' 305..307 CDD:409353 0/1 (0%)
Ig strand D 331..335 CDD:409353 0/3 (0%)
Ig strand E 338..343 CDD:409353 0/4 (0%)
Ig strand F 351..359 CDD:409353 0/7 (0%)
Ig strand G 362..372 CDD:409353 1/9 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..466 23/94 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 656..722 16/81 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24366
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.