Sequence 1: | NP_001356954.1 | Gene: | haf / 33339 | FlyBaseID: | FBgn0261509 | Length: | 1347 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_573455.1 | Gene: | Lgr6 / 498233 | RGDID: | 1560339 | Length: | 965 | Species: | Rattus norvegicus |
Alignment Length: | 367 | Identity: | 111/367 - (30%) |
---|---|---|---|
Similarity: | 163/367 - (44%) | Gaps: | 76/367 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 TTPLLLLLPLILGRLHVAHA-----------QCPWQRDVPDLQTSCICAYNLGRELSVQCDQVDF 67
Fly 68 SQLLAAMNTHARLKPVDL--------LYVNNSTISELPDAVFSNLS-LHNLQLSSCGIQRIATGA 123
Fly 124 FKGQESVLRNLNLQDNLLADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNN 188
Fly 189 VTLASNAFRGLEQSLKNLNLKGTKQRKVP-ESIRGLKSLAFLDLSQNGIKELPGAGGIRVFDGLD 252
Fly 253 ALTALNLERNLIQSIGETAFAGVRKTLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLP 317
Fly 318 EAAFRGNPGITLLALDGNPLSSVPEGAFAHLNATLRGLSLGG 359 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
haf | NP_001356954.1 | LRR | <52..>252 | CDD:227223 | 58/209 (28%) |
leucine-rich repeat | 86..105 | CDD:275380 | 6/18 (33%) | ||
leucine-rich repeat | 106..129 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 131..189 | CDD:338972 | 25/57 (44%) | ||
leucine-rich repeat | 131..154 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 155..178 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 179..202 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 203..225 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 226..253 | CDD:275380 | 7/26 (27%) | ||
LRR_8 | 254..337 | CDD:338972 | 30/82 (37%) | ||
leucine-rich repeat | 254..302 | CDD:275380 | 19/47 (40%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 327..350 | CDD:275380 | 6/22 (27%) | ||
PCC | 332..>413 | CDD:188093 | 11/28 (39%) | ||
PRK10927 | <1061..>1097 | CDD:236797 | |||
Lgr6 | XP_573455.1 | LRRNT | 34..68 | CDD:214470 | 12/54 (22%) |
LRR_RI | <70..248 | CDD:238064 | 65/209 (31%) | ||
leucine-rich repeat | 70..91 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 92..150 | CDD:290566 | 24/58 (41%) | ||
leucine-rich repeat | 92..115 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 116..139 | CDD:275380 | 11/22 (50%) | ||
LRR_8 | 138..198 | CDD:290566 | 20/83 (24%) | ||
leucine-rich repeat | 140..163 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 164..187 | CDD:275380 | 8/46 (17%) | ||
LRR_8 | 186..246 | CDD:290566 | 20/64 (31%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 7/26 (27%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 236..258 | CDD:275380 | 10/22 (45%) | ||
LRR_RI | 253..>442 | CDD:238064 | 22/63 (35%) | ||
LRR_8 | 258..314 | CDD:290566 | 20/56 (36%) | ||
leucine-rich repeat | 259..282 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 283..304 | CDD:275380 | 5/20 (25%) | ||
LRR_8 | 305..364 | CDD:290566 | 5/10 (50%) | ||
leucine-rich repeat | 330..344 | CDD:275378 | |||
leucine-rich repeat | 354..375 | CDD:275380 | |||
LRR_8 | 375..434 | CDD:290566 | |||
leucine-rich repeat | 376..399 | CDD:275380 | |||
leucine-rich repeat | 400..421 | CDD:275380 | |||
leucine-rich repeat | 424..444 | CDD:275380 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |