DRSC/TRiP Functional Genomics Resources

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Protein Alignment haf and CG7702

DIOPT Version :9

Sequence 1:NP_001356954.1 Gene:haf / 33339 FlyBaseID:FBgn0261509 Length:1347 Species:Drosophila melanogaster
Sequence 2:NP_650740.1 Gene:CG7702 / 42242 FlyBaseID:FBgn0038638 Length:537 Species:Drosophila melanogaster


Alignment Length:513 Identity:119/513 - (23%)
Similarity:173/513 - (33%) Gaps:178/513 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLLLLP----LILGRLHVAHAQCPWQRDVPDLQTSCICA----------YNLGRELSVQCDQVDF 67
            |||.|.    |:...:...|...|:| .|.::..:|:|.          :||      .|...:|
  Fly     6 LLLFLAGAALLLATEVRSQHEDIPYQ-PVSNICQTCLCLSTQDVDHRTHFNL------DCSVRNF 63

  Fly    68 SQLLA---------AMNTHARLKPVDLLYVNN--STISELPDAVFSNLSLHNLQLSSCGIQRIAT 121
            ..:||         |:.:.|..:.| :.|..|  ..:.:||   .:|.|| .|....||:|    
  Fly    64 EHILARWPEQFGSQAIASGAASEIV-VSYSGNRIKLLQQLP---ATNASL-TLSCRHCGLQ---- 119

  Fly   122 GAFKGQESVLRNLNLQDNLLADVP-VEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLN 185
                         :||..|..||| |:||.:            ..:.|.|||             
  Fly   120 -------------DLQAPLFMDVPNVQALYI------------SWNDITDDA------------- 146

  Fly   186 DNNVTLASNAFRGLEQSLKNLNLKGTKQRKVPESIRGLKSLAFLDLSQNGIKELPGAGGIRVFDG 250
                 |..:.|||        ..:.|:...:     ||:.   ||||.|.|..|..    |:|:.
  Fly   147 -----LVPDLFRG--------PFRNTRYEPI-----GLRD---LDLSHNRIVRLDR----RLFEH 186

  Fly   251 LDALTALNLERNLIQSIGE--TAFAGVRKTLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLL 313
            ...||.|||..|.:.|:.|  ||..|...||..|.|.:|.|...|......|..||.||:..|..
  Fly   187 TPHLTKLNLAYNKLSSLDEATTASIGSVATLQRLDLSHNGLMTLPAQLFSKLTSLRFLDVSGNEF 251

  Fly   314 TSLPEAAFRGNPGITLLALDGNPLSSVPEGAFAHLNA----------TLRGLSLGGRFL----HC 364
            :::|.:.......:..|.|.||...|:.|.:...|.:          :||.|..|...|    |.
  Fly   252 STMPASLQLLGKSLVQLNLAGNAFLSLKENSLQGLVSLKRLNISSMPSLRSLEKGALNLPALEHL 316

  Fly   365 DCKLRWVAEWIRNGDLQVTSRERNPQFCGTPPRFRDRGFYSIQPEELSCPDIADAALRGPVGLAD 429
            ||.        ||..|                            |.|...|:..:.....:.|:.
  Fly   317 DCS--------RNSKL----------------------------ERLELADLLSSRNLSQLDLSW 345

  Fly   430 NLKPTLPSSPDSVEYETGTGTGTVGTGTAASAPVTSSVSSSTSTTTPTTTTTTTTAEP 487
            |...||      |...||:               :::.|:||:.|.|.....:.:..|
  Fly   346 NALTTL------VINATGS---------------SNNSSNSTNETWPRLRRMSISGNP 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hafNP_001356954.1 LRR <52..>252 CDD:227223 49/211 (23%)
leucine-rich repeat 86..105 CDD:275380 5/20 (25%)
leucine-rich repeat 106..129 CDD:275380 5/22 (23%)
LRR_8 131..189 CDD:338972 13/58 (22%)
leucine-rich repeat 131..154 CDD:275380 9/23 (39%)
leucine-rich repeat 155..178 CDD:275380 4/22 (18%)
leucine-rich repeat 179..202 CDD:275380 4/22 (18%)
leucine-rich repeat 203..225 CDD:275380 3/21 (14%)
leucine-rich repeat 226..253 CDD:275380 9/26 (35%)
LRR_8 254..337 CDD:338972 29/84 (35%)
leucine-rich repeat 254..302 CDD:275380 19/49 (39%)
leucine-rich repeat 303..326 CDD:275380 6/22 (27%)
leucine-rich repeat 327..350 CDD:275380 7/22 (32%)
PCC 332..>413 CDD:188093 19/94 (20%)
PRK10927 <1061..>1097 CDD:236797
CG7702NP_650740.1 leucine-rich repeat 110..131 CDD:275380 9/37 (24%)
LRR_RI <123..267 CDD:238064 52/193 (27%)
leucine-rich repeat 132..165 CDD:275380 12/75 (16%)
LRR_8 165..227 CDD:290566 27/68 (40%)
leucine-rich repeat 166..189 CDD:275380 10/29 (34%)
leucine-rich repeat 190..213 CDD:275380 10/22 (45%)
LRR_8 216..273 CDD:290566 16/56 (29%)
leucine-rich repeat 217..240 CDD:275380 7/22 (32%)
leucine-rich repeat 241..264 CDD:275380 6/22 (27%)
LRR_8 263..321 CDD:290566 15/65 (23%)
leucine-rich repeat 265..288 CDD:275380 7/22 (32%)
leucine-rich repeat 289..312 CDD:275380 5/22 (23%)
leucine-rich repeat 313..337 CDD:275380 9/59 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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