DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment haf and CG42346

DIOPT Version :9

Sequence 1:NP_001356954.1 Gene:haf / 33339 FlyBaseID:FBgn0261509 Length:1347 Species:Drosophila melanogaster
Sequence 2:NP_001036303.2 Gene:CG42346 / 3355160 FlyBaseID:FBgn0259677 Length:1817 Species:Drosophila melanogaster


Alignment Length:1106 Identity:225/1106 - (20%)
Similarity:348/1106 - (31%) Gaps:398/1106 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DVPDLQTSCICAYNLGRELSVQCDQVDFSQLLAAMNTHARLKPVDLLYVNNSTISELPDAVFS-N 103
            |:|:|:...:...|.....||        .::|.|..  ||:.:..|.::|.::.::||.:|: |
  Fly   912 DIPNLRRLLLSHNNFSYAGSV--------GIMAGMLD--RLRSLQQLSMSNCSLGQIPDLLFAKN 966

  Fly   104 LSLHNLQLSSCGIQRIATGAFKGQESVLRNLNLQDNLLADVPVEALKVLGKLNLLDLSKNQLSHI 168
            .:|..|.|....:.:|....|.|. :|.:.|.|..|.|:|.|..||..|..|..|||::|||:.|
  Fly   967 TNLVRLDLCDNRLTQINRNIFSGL-NVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASI 1030

  Fly   169 PDDAFVGLTKLSTLKLNDNNVT-----------------------------------------LA 192
            ......|...|..|.|.||.:|                                         |:
  Fly  1031 DFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLS 1095

  Fly   193 SNAFRGLEQS---------LKNLNLKG--------TKQRKVP-----------------ESIRGL 223
            :|.|..:..|         |..|||.|        .|:.:.|                 :.....
  Fly  1096 NNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSKDFEAF 1160

  Fly   224 KSLAFLDLSQNGIKEL-PGAGGIRVFDGLDALTALNLERNLIQSIGETAFAGVRKTLSSLSLLNN 287
            ::|..|.|..|.|..: |||     |..|..|..|:|..|.::.:.:....|:| .|..|::.:|
  Fly  1161 QALQHLHLVNNRITRISPGA-----FKSLTNLLTLDLSVNELEMLPKERLQGLR-LLRFLNISHN 1219

  Fly   288 L---LAEFPIGAVHSLKELRVLDIGFNLLTSLPEAAFRGNPGITLLALDGNPLSSVPEGAFAH-- 347
            .   |.||.:    .|.|::.||:.||.|..:.:..||...|:..|.|.||.::.:...||..  
  Fly  1220 TLKDLEEFSV----DLLEMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSNDAFRFLR 1280

  Fly   348 ----------------------LNATLRGLSLGGRFLHCDCKLRWVAEWIRN------------- 377
                                  |...||.|.|....|||.|..:.:.||:|:             
  Fly  1281 KLHVLDLRKNYFELVPLEPLRPLETNLRTLRLEENPLHCSCDAQKLWEWLRDHRKWSLSMGSGAG 1345

  Fly   378 -----------GDL--------------QVTSRERNPQFCGTP--PRFRDRGFYSIQPEELSCPD 415
                       ||.              :|..|....|||..|  |:.   ....|||..:    
  Fly  1346 RGIGGLTGGLGGDSINYLRCEHPTELRGKVFGRMEPQQFCDAPLIPKM---AIQDIQPYSV---- 1403

  Fly   416 IADAALRGPVGLADNLKPTLPSSPDSVEYETGTGTGTVGTGTAASAPVTSSVSSSTSTTTPTTTT 480
            :.....|..:||         :..:.|.:.||.|..|.|      :|.:....|......|....
  Fly  1404 VVSWQSRDHLGL---------NGFEIVYHATGDGLVTAG------SPTSRERDSLRDIHDPERQR 1453

  Fly   481 TTTTAEPTTR-RSTTRPPTKSTTTISATTASPASNPPVNG---TGTVQATSITTSSSSSSSSSTS 541
            |...|...:| |...|...:...:|        :...::|   .||..:|.:|..|.::......
  Fly  1454 TRDQARERSRERDRDRERDRERFSI--------ATDEIHGKRLNGTASSTKLTKLSPNTRYHICV 1510

  Fly   542 TGHGNGKQ--------------------------------APGWRQGVTNGNGNSGVGGAGGLHK 574
            .|.||...                                :|...|...|.|||:........:|
  Fly  1511 IGSGNWLSEPLANALQRLHTNESLREEEAVMMSAPLPESFSPYQHQHNRNSNGNANPAMVQDHNK 1575

  Fly   575 PQRPPLVLGYPPQRGTRIDDANEVQVKHAFRQDSSVIIQWDSDTANILGFRVVYRLFGEKAFKQG 639
            .|.|                                    |.|..|::|                
  Fly  1576 KQNP------------------------------------DQDLDNVVG---------------- 1588

  Fly   640 PPLESSEREFKIKNVPAQECIIVCVISLEELHVTPETVPYQQCREVRTVASQASNMDKITIAASA 704
                             |:..::.|  |:..|::       .|.:|:|:.|..|.:......:|.
  Fly  1589 -----------------QDNALMEV--LKNSHIS-------ACTDVQTLDSTPSLVTDENGLSSN 1627

  Fly   705 AICGTIIVAVIVFIAASRRSRKLQSSQQKSPLPIGGLPVNCCGPTGSPGPLGSIATLSAFNNHKE 769
            ....:|:            :|:|            ||.|.||        ||.|..:.       
  Fly  1628 GFIHSIL------------TRRL------------GLIVGCC--------LGIIVFIV------- 1653

  Fly   770 WDQVSAYSGRSIPRPRIYPVEQ----PDDMRS--HFSGMPGKVGKSRSLADGQSQHSFSNNSHRG 828
              .:|..|...:.:.||...::    |.:..|  |||....::.::.:.|...:..:.:||||  
  Fly  1654 --MISVLSYVKLKKKRIENAKRQAALPPEYISYRHFSIPNEELTRTAANAGTVAAAAAANNSH-- 1714

  Fly   829 YLGSAFPSNLVNSRPELRQSRQSLAAASERMSRASYAGSIHGGNGGGGGLGGNGGGGG------- 886
                    |..||..|         .:|..||......|.| .:|.....||.|.|..       
  Fly  1715 --------NSNNSTDE---------GSSPHMSSVPSGISAH-ISGTSLSTGGTGTGSTTTTATTP 1761

  Fly   887 -NGLPVSSLMAMSGMVGGGGPASIASSARRSRPRSRSREQLNTTHIHNHRPGSRYSQAGSTHTLN 950
             .|:|:..  |.|.:||.|  ..:|.|:          ..:...|.|.|....|:..||.....|
  Fly  1762 IGGVPLGK--AGSTLVGVG--LVVADSS----------VDVGYAHNHAHAHAHRHMAAGVVLNTN 1812

  Fly   951 N 951
            :
  Fly  1813 H 1813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hafNP_001356954.1 LRR <52..>252 CDD:227223 64/276 (23%)
leucine-rich repeat 86..105 CDD:275380 6/19 (32%)
leucine-rich repeat 106..129 CDD:275380 6/22 (27%)
LRR_8 131..189 CDD:338972 23/57 (40%)
leucine-rich repeat 131..154 CDD:275380 9/22 (41%)
leucine-rich repeat 155..178 CDD:275380 9/22 (41%)
leucine-rich repeat 179..202 CDD:275380 9/63 (14%)
leucine-rich repeat 203..225 CDD:275380 7/46 (15%)
leucine-rich repeat 226..253 CDD:275380 10/27 (37%)
LRR_8 254..337 CDD:338972 26/85 (31%)
leucine-rich repeat 254..302 CDD:275380 13/50 (26%)
leucine-rich repeat 303..326 CDD:275380 7/22 (32%)
leucine-rich repeat 327..350 CDD:275380 7/46 (15%)
PCC 332..>413 CDD:188093 29/144 (20%)
PRK10927 <1061..>1097 CDD:236797
CG42346NP_001036303.2 leucine-rich repeat 303..325 CDD:275380
LRR_8 325..384 CDD:290566
leucine-rich repeat 327..350 CDD:275380
leucine-rich repeat 351..461 CDD:275380
LRR_8 373..433 CDD:290566
LRR_RI 397..648 CDD:238064
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 462..485 CDD:275380
LRR_8 465..520 CDD:290566
leucine-rich repeat 486..509 CDD:275380
LRR_8 508..567 CDD:290566
leucine-rich repeat 510..533 CDD:275380
LRR_RI 527..785 CDD:238064
leucine-rich repeat 534..556 CDD:275380
LRR_8 555..613 CDD:290566
leucine-rich repeat 557..580 CDD:275380
leucine-rich repeat 581..604 CDD:275380
LRR_8 604..663 CDD:290566
leucine-rich repeat 605..628 CDD:275380
leucine-rich repeat 629..652 CDD:275380
LRR_8 652..711 CDD:290566
leucine-rich repeat 653..676 CDD:275380
leucine-rich repeat 677..700 CDD:275380
leucine-rich repeat 701..748 CDD:275380
leucine-rich repeat 725..736 CDD:275378
leucine-rich repeat 749..772 CDD:275380
LRR_8 771..831 CDD:290566
leucine-rich repeat 773..793 CDD:275380
LRR_RI 804..1076 CDD:238064 47/174 (27%)
LRR_8 821..903 CDD:290566
leucine-rich repeat 821..844 CDD:275380
leucine-rich repeat 845..868 CDD:275380
leucine-rich repeat 869..892 CDD:275380
leucine-rich repeat 893..915 CDD:275380 1/2 (50%)
leucine-rich repeat 916..944 CDD:275380 8/37 (22%)
leucine-rich repeat 945..968 CDD:275380 6/22 (27%)
LRR_8 967..1027 CDD:290566 21/60 (35%)
leucine-rich repeat 969..992 CDD:275380 6/23 (26%)
leucine-rich repeat 993..1014 CDD:275380 8/20 (40%)
LRR_8 1015..1075 CDD:290566 15/59 (25%)
leucine-rich repeat 1017..1040 CDD:275380 9/22 (41%)
leucine-rich repeat 1041..1064 CDD:275380 6/22 (27%)
LRR_RI <1047..1244 CDD:238064 42/206 (20%)
LRR_8 1063..1125 CDD:290566 9/61 (15%)
leucine-rich repeat 1089..1114 CDD:275380 4/24 (17%)
leucine-rich repeat 1115..1162 CDD:275380 7/46 (15%)
LRR_8 1163..1219 CDD:290566 18/61 (30%)
leucine-rich repeat 1163..1186 CDD:275380 10/27 (37%)
leucine-rich repeat 1187..1210 CDD:275380 6/23 (26%)
leucine-rich repeat 1211..1233 CDD:275380 7/25 (28%)
leucine-rich repeat 1234..1257 CDD:275380 7/22 (32%)
LRR_8 1235..1292 CDD:290566 14/56 (25%)
leucine-rich repeat 1258..1279 CDD:275380 6/20 (30%)
leucine-rich repeat 1282..1306 CDD:275380 1/23 (4%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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