| Sequence 1: | NP_001356954.1 | Gene: | haf / 33339 | FlyBaseID: | FBgn0261509 | Length: | 1347 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_232237.6 | Gene: | Lrig1 / 312574 | RGDID: | 1306788 | Length: | 1096 | Species: | Rattus norvegicus |
| Alignment Length: | 1111 | Identity: | 244/1111 - (21%) |
|---|---|---|---|
| Similarity: | 376/1111 - (33%) | Gaps: | 336/1111 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 RPGRTTTALPAATTPLLLLLPLILGRL------HVAHA-----------------QCPWQ----- 38
Fly 39 -RDVPDLQTSCICAYNLGRELSVQCDQVDFSQL------------------LAAMNTH------- 77
Fly 78 ---------ARLK---PVDLLYVNNSTISELPDAVFSN-LSLHNLQLSSCGIQRIATGAFKGQES 129
Fly 130 VLRNLNLQDNLLADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNNVT-LAS 193
Fly 194 NAFRGLEQSLKNLNLKGTKQRKVPE-SIRGLKSLAFLDLSQNGIKELPGAGGIRVFDGLDALTAL 257
Fly 258 NLERNLIQSIGETAFAGVRKTLSSLSLL---NNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPE- 318
Fly 319 --AAFRGNPGITLLALDGNPLSSVPEGAFA------HLN-----------------ATLRGLSLG 358
Fly 359 GRFLHCDCKLRWVAEWIRNGDLQ--VTSRERNPQFCGTPPRFRDRGFYSIQPEELSCPDIADAAL 421
Fly 422 RGPVGLADNLKPTLPSSPDSVEYETGTGTG-TVGTGTAASAPVTSSVSSSTSTTTPTTT------ 479
Fly 480 ----------TTTTTAEPTTRRSTTRPPTKSTTTISATTASPAS---NPPVNGTGTVQATSITTS 531
Fly 532 SSSSSSSSTSTGHGNGKQAPGWRQGVTNGNGNSGVGGAGGLHKPQRPPLVLGYPPQRGTRI---- 592
Fly 593 -DD--------ANEVQVKHAFRQDSS---------VIIQWDS------DTANILGFRVVYRLFGE 633
Fly 634 KA----------FKQGPPLESSERE--------FKIKNVPAQE-----CIIVCVISLEELHVTPE 675
Fly 676 TVPYQQCREVRTVASQASNMDKITIAASAAICGTIIVAVIVFIAASRRSRKLQSSQQKSPLPIGG 740
Fly 741 LPVNCCGPTGSPGPLGSIATLS-------------AFNNHKE----------------------- 769
Fly 770 ------------WDQVSAYSGRSIPRP------------RIYPVEQPDDMRSH------FSGMPG 804
Fly 805 KVGKSRSLADGQSQHSFSNNSHRGYL-----------GSAFPSNLVNSRPELRQSRQSLAAASER 858
Fly 859 MSRASY 864 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| haf | NP_001356954.1 | LRR | <52..>252 | CDD:227223 | 67/239 (28%) |
| leucine-rich repeat | 86..105 | CDD:275380 | 5/19 (26%) | ||
| leucine-rich repeat | 106..129 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 131..189 | CDD:338972 | 23/57 (40%) | ||
| leucine-rich repeat | 131..154 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 155..178 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 179..202 | CDD:275380 | 11/23 (48%) | ||
| leucine-rich repeat | 203..225 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 226..253 | CDD:275380 | 7/26 (27%) | ||
| LRR_8 | 254..337 | CDD:338972 | 29/88 (33%) | ||
| leucine-rich repeat | 254..302 | CDD:275380 | 15/50 (30%) | ||
| leucine-rich repeat | 303..326 | CDD:275380 | 9/25 (36%) | ||
| leucine-rich repeat | 327..350 | CDD:275380 | 11/45 (24%) | ||
| PCC | 332..>413 | CDD:188093 | 26/105 (25%) | ||
| PRK10927 | <1061..>1097 | CDD:236797 | |||
| Lrig1 | XP_232237.6 | LRR_8 | 76..132 | CDD:290566 | 10/59 (17%) |
| LRR_4 | 76..115 | CDD:289563 | 7/42 (17%) | ||
| leucine-rich repeat | 76..98 | CDD:275380 | 7/25 (28%) | ||
| leucine-rich repeat | 99..114 | CDD:275380 | 0/14 (0%) | ||
| leucine-rich repeat | 122..145 | CDD:275380 | 2/22 (9%) | ||
| LRR_RI | 138..421 | CDD:238064 | 94/292 (32%) | ||
| LRR_8 | 145..228 | CDD:290566 | 28/83 (34%) | ||
| leucine-rich repeat | 146..169 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 170..193 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 194..217 | CDD:275380 | 9/23 (39%) | ||
| LRR_8 | 216..276 | CDD:290566 | 22/60 (37%) | ||
| leucine-rich repeat | 218..241 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 242..265 | CDD:275380 | 11/22 (50%) | ||
| LRR_8 | 264..324 | CDD:290566 | 17/64 (27%) | ||
| leucine-rich repeat | 266..289 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 290..313 | CDD:275380 | 7/26 (27%) | ||
| LRR_8 | 313..372 | CDD:290566 | 21/62 (34%) | ||
| leucine-rich repeat | 314..337 | CDD:275380 | 7/26 (27%) | ||
| leucine-rich repeat | 338..361 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 362..386 | CDD:275380 | 8/23 (35%) | ||
| LRR_8 | 388..444 | CDD:290566 | 13/55 (24%) | ||
| leucine-rich repeat | 389..412 | CDD:275380 | 8/22 (36%) | ||
| LRR_4 | 411..>444 | CDD:289563 | 5/32 (16%) | ||
| leucine-rich repeat | 413..434 | CDD:275380 | 3/20 (15%) | ||
| LRRCT | 447..495 | CDD:214507 | 14/53 (26%) | ||
| I-set | 500..600 | CDD:254352 | 15/99 (15%) | ||
| Ig | 517..591 | CDD:143165 | 10/73 (14%) | ||
| I-set | 604..694 | CDD:254352 | 19/115 (17%) | ||
| Ig_1 | 621..695 | CDD:143240 | 16/99 (16%) | ||
| I-set | 698..785 | CDD:254352 | 18/89 (20%) | ||
| IGc2 | 712..775 | CDD:197706 | 14/65 (22%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||