Sequence 1: | NP_001356954.1 | Gene: | haf / 33339 | FlyBaseID: | FBgn0261509 | Length: | 1347 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_216905.5 | Gene: | Lrig3 / 299830 | RGDID: | 1561255 | Length: | 1116 | Species: | Rattus norvegicus |
Alignment Length: | 951 | Identity: | 197/951 - (20%) |
---|---|---|---|
Similarity: | 328/951 - (34%) | Gaps: | 274/951 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 LPLILGRLHVAHAQCPWQRDVPDLQTSCICAYNLGRELSVQCDQVD-----------FSQLLAAM 74
Fly 75 NTHARLKP--------VDLLYVNNSTISELPDAVFSNLSLHNLQLSSCGIQRIATGAFKGQESVL 131
Fly 132 RNLNLQDNLLADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNNVT-LASNA 195
Fly 196 FRGLEQ-----------------------SLKNLNLKGTKQRKV-PESIRGLKSLAFLDLSQNGI 236
Fly 237 KELPGAGGIRVFDGLDALTALNLERNLIQSIGETAFAGVRKTLSSLSLLNNLLA---EFPIGAVH 298
Fly 299 SLKELRVLDIGFNLLTSLPEAAFRGNPGITLLALDGNPLSSVPEGAFAHLNATLRGLSLGGRFLH 363
Fly 364 CDCKLRWVAEWIRNGDLQVTSRERNPQF----CGTPPRFRDRGFYSIQPEELSCPDIADAALRGP 424
Fly 425 VGLADNLKPTLPSSPDSVEYETGTGTGTVGTGTAASAPVTSSVSSSTSTTTPTTTTTTTTAEPTT 489
Fly 490 RRSTTRPPTKSTTTISATTASPASNPPVNGTGTVQATSITTSSSSSSS-----------SSTST- 542
Fly 543 ------------------GH---------GNGKQAPGWRQ----------------------GVT 558
Fly 559 NGNGNSGVGGAGG------LHKPQ--RPPL----------VL-----GYPPQR--GTRIDDANEV 598
Fly 599 QVKHAFRQDSSVIIQWDSDTANILGFRVVYRLFGEKAFKQGPPLESSEREFKIKNVPAQECIIVC 663
Fly 664 VISLEELHVTPETVPYQQCREVRTVASQASNMDKITIAASAAICGTIIVAVIVFIAASRRSRKLQ 728
Fly 729 SSQQKSPLPIGGLPVNCCGPTGSPGPLGSIATLSAFNNHKEWDQVSAYSGRSIPRPRIYPVEQPD 793
Fly 794 DMRSHFSGMPGKVGKSRSLADGQSQH-SFSNNSHRGYLGSA 833 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
haf | NP_001356954.1 | LRR | <52..>252 | CDD:227223 | 58/243 (24%) |
leucine-rich repeat | 86..105 | CDD:275380 | 8/18 (44%) | ||
leucine-rich repeat | 106..129 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 131..189 | CDD:338972 | 18/57 (32%) | ||
leucine-rich repeat | 131..154 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 155..178 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 179..202 | CDD:275380 | 11/46 (24%) | ||
leucine-rich repeat | 203..225 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 226..253 | CDD:275380 | 9/26 (35%) | ||
LRR_8 | 254..337 | CDD:338972 | 29/85 (34%) | ||
leucine-rich repeat | 254..302 | CDD:275380 | 17/50 (34%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 327..350 | CDD:275380 | 7/22 (32%) | ||
PCC | 332..>413 | CDD:188093 | 22/84 (26%) | ||
PRK10927 | <1061..>1097 | CDD:236797 | |||
Lrig3 | XP_216905.5 | LRR_RI | <68..228 | CDD:238064 | 39/163 (24%) |
LRR_8 | 76..133 | CDD:290566 | 10/62 (16%) | ||
leucine-rich repeat | 76..99 | CDD:275378 | 5/28 (18%) | ||
leucine-rich repeat | 100..115 | CDD:275378 | 1/14 (7%) | ||
LRR_8 | 122..179 | CDD:290566 | 17/57 (30%) | ||
leucine-rich repeat | 147..168 | CDD:275380 | 8/21 (38%) | ||
LRR_8 | 168..227 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 194..216 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 215..275 | CDD:290566 | 18/59 (31%) | ||
LRR_4 | 215..254 | CDD:289563 | 13/38 (34%) | ||
leucine-rich repeat | 217..240 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 241..264 | CDD:275380 | 11/22 (50%) | ||
LRR_RI | 262..>446 | CDD:238064 | 49/189 (26%) | ||
LRR_8 | 263..323 | CDD:290566 | 9/59 (15%) | ||
leucine-rich repeat | 265..288 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 289..312 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 312..371 | CDD:290566 | 22/63 (35%) | ||
leucine-rich repeat | 313..336 | CDD:275380 | 9/26 (35%) | ||
leucine-rich repeat | 337..360 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 359..422 | CDD:290566 | 21/62 (34%) | ||
leucine-rich repeat | 361..385 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 388..411 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 412..435 | CDD:275380 | 7/23 (30%) | ||
LRRCT | 446..494 | CDD:214507 | 13/55 (24%) | ||
Ig_3 | 498..585 | CDD:290638 | 17/97 (18%) | ||
I-set | 499..599 | CDD:254352 | 19/110 (17%) | ||
I-set | 603..693 | CDD:254352 | 11/89 (12%) | ||
Ig_1 | 620..694 | CDD:143240 | 8/73 (11%) | ||
I-set | 697..784 | CDD:254352 | 21/96 (22%) | ||
IGc2 | 711..774 | CDD:197706 | 16/72 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |