DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment haf and AT1G54475

DIOPT Version :9

Sequence 1:	NP_001356954.1	Gene:	haf / 33339	FlyBaseID:	FBgn0261509	Length:	1347	Species:	Drosophila melanogaster
Sequence 2:	NP_001320765.1	Gene:	AT1G54475 / 28717354	AraportID:	AT1G54475	Length:	209	Species:	Arabidopsis thaliana

Alignment Length:	186	Identity:	50/186 - (26%)
Similarity:	76/186 - (40%)	Gaps:	37/186 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   229 LDLSQNGIKELPGAGGIRVFDGLDALTALNLERNLIQSIGETAFAGVRKTLSSLSLLNNLLAEFP 293
            :|||.|   ||.|.....: ..|..|..:||..|.:.|...::|:.: |.:.||.|.:|:|....
plant    25 MDLSSN---ELSGVIPAEL-GSLSKLRVMNLSCNFLSSSIPSSFSNL-KDIESLDLSHNMLQGSI 84

  Fly   294 IGAVHSLKELRVLDIGFNLLTSL----------PEAAFRGNPGI----TLLALDGNPLSSVPEG- 343
            ...:.:|..|.|.|:.:|.|:.:          .|.::.|||.:    |..:.|....|...|.
plant    85 PQQLTNLSSLVVFDVSYNNLSGIIPQGRQFNTFDEKSYLGNPLLCGPPTNRSCDAKKTSDESENG 149

  Fly   344 -------------AFAHLNATLRGLSLGGRF-LHC-DCKLRWVAEWIRNGDLQVTS 384
                         ||...:|:....:|.|.| |.| ||.||  ..|:|..|..:.|
plant   150 GEEEDDEAPVDMLAFYFSSASTYVTTLIGIFILMCFDCPLR--RAWLRIVDASIAS 203

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
haf	NP_001356954.1	LRR	<52..>252	CDD:227223	7/22 (32%)
		leucine-rich repeat	86..105	CDD:275380
		leucine-rich repeat	106..129	CDD:275380
		LRR_8	131..189	CDD:338972
		leucine-rich repeat	131..154	CDD:275380
		leucine-rich repeat	155..178	CDD:275380
		leucine-rich repeat	179..202	CDD:275380
		leucine-rich repeat	203..225	CDD:275380
		leucine-rich repeat	226..253	CDD:275380	8/23 (35%)
		LRR_8	254..337	CDD:338972	24/96 (25%)
		leucine-rich repeat	254..302	CDD:275380	13/47 (28%)
		leucine-rich repeat	303..326	CDD:275380	8/32 (25%)
		leucine-rich repeat	327..350	CDD:275380	6/40 (15%)
		PCC	332..>413	CDD:188093	19/69 (28%)
		PRK10927	<1061..>1097	CDD:236797
AT1G54475	NP_001320765.1	PLN00113	<25..>130	CDD:215061	30/109 (28%)
		leucine-rich repeat	26..45	CDD:275380	8/22 (36%)
		leucine-rich repeat	46..69	CDD:275380	6/23 (26%)
		leucine-rich repeat	70..93	CDD:275380	6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910