DRSC/TRiP Functional Genomics Resources

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Protein Alignment haf and iglr-1

DIOPT Version :10

Sequence 1:NP_001356954.1 Gene:haf / 33339 FlyBaseID:FBgn0261509 Length:1347 Species:Drosophila melanogaster
Sequence 2:NP_510491.2 Gene:iglr-1 / 184720 WormBaseID:WBGene00008977 Length:695 Species:Caenorhabditis elegans


Alignment Length:731 Identity:149/731 - (20%)
Similarity:249/731 - (34%) Gaps:176/731 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 WQRDVPDLQTSCICAYNLGRELSVQCD-QVDFSQLLAAMNTHARLKPVDLLYVNNSTISELPDAV 100
            |.|.:||:...        |.|.||.. .:|.|......|....|:   .|:..|.::...|.|:
 Worm    70 WLRMLPDMPKL--------RVLKVQSSPSLDDSDWFLRRNQFPELQ---TLHFKNCSLKTFPKAL 123

  Fly   101 FSNLSLHNLQLSSCGIQRIATGAFKGQESV----LRNLNLQDNLLADVPVEALKVLGKLNLLDLS 161
            .:..||..|.||...::.:      |.:|:    ::.:.|::|.:..:.|...:.:..|.:||||
 Worm   124 MALTSLLELDLSDNMLENL------GADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLS 182

  Fly   162 KNQLSHIPDDAFVGLTKLSTLKLNDNNVTLASNAFRGLEQSLKNLNLKGTKQRKVPESIRGLKSL 226
            .|.::.:....|.....|..|.|.:|.:.|.........|.|:.|:|.|           .|.|.
 Worm   183 GNNMTRLVTSDFTSAVSLRELILRENKIELIETDTTEPMQQLETLDLSG-----------NLLSE 236

  Fly   227 AFLDLSQNGIKELPGAGGIRVFDGLDALTALNLERNLIQSIGETAFAGVRKTLSSLSLLNNLLAE 291
            ..|:..||                ...|.:|||..|.:|.|.| .|..: ..|..|.|.|..::.
 Worm   237 VRLEAQQN----------------FRHLFSLNLSCNPLQIIRE-GFLQL-PDLQVLQLDNCNISV 283

  Fly   292 FPIGAVHSLKELRVLDIGFN-LLTSLPEAAFRGNPGITLLALDGNPLSSVPEGAFAHLNATLRGL 355
            ...||..||..|..:||..| .|......||..|.....:.:..:....:|......::.    |
 Worm   284 VEAGAFVSLPRLHSMDIKDNPNLAYFSPYAFSNNTAFYRMNIQNSGFKRIPLTILEKISQ----L 344

  Fly   356 SLGGRFLHCDCKLRWVAEWIRNGDLQVTSRERNPQFCGTPPRFRDRGFYSIQPEELSCPDIADAA 420
            .:.|..|.|.|                |||:           .:|.|..:|       .|..||.
 Worm   345 YIKGTQLDCSC----------------TSRD-----------MQDYGAITI-------VDWNDAT 375

  Fly   421 LRGPVGLA---DNLKPTLPSSPDSVEYETG-TGTGTVGTGTAASAPVTSSVSSSTSTTTPTTTTT 481
            .:..:|..   .:|:.|.....|::....| ..|.|||....... .....:|.....:| ..||
 Worm   376 CKTKIGAVQKLSHLEKTGEPCRDNLLTPFGIRQTATVGHSYRIYC-ANDGTNSKLLWISP-NKTT 438

  Fly   482 TTTAEPTTRRSTTRPPTKSTTTISATTASPASNPPVNGTGTVQATSITTSSS-------SSSSSS 539
            ...:.|..|:|:.:.....|||:...:.|......::.:.......:...:.       |.|...
 Worm   439 IEASHPKLRKSSDKRTDYFTTTLLDPSFSRNHEERIHISNEYYGFDVVLENDAGHYECVSKSDMK 503

  Fly   540 TSTGHGNGKQAPGWRQGVTNGNGNSGVGGAGGLHKPQ----RPPLVLGYPPQRGTRIDDANEVQV 600
            |.|                              .|.:    :|.:.|           :|:.|..
 Worm   504 TIT------------------------------RKIELEVVKPNIYL-----------NASHVAT 527

  Fly   601 KHAFRQDSSVIIQWDSDTANILGFRVVYRL--FGEKAFKQGPPLE--SSEREFKIKNVPAQECII 661
                   :||.:.|:.:.......||..|:  ..||.||:...|.  :..|.:.:.|:.|.:..:
 Worm   528 -------TSVHLNWNRNLKIEAVDRVALRITASSEKMFKRQVQLSLYNMFRSYNLVNLSADKEYL 585

  Fly   662 VCVISLEELHVTP-ETVPYQQCREVRT----VASQASNMDKITIAASAAI-------CGTIIVAV 714
            :|:    |.::|. :.|.|..|...:|    ...|:.|. |:.||....:       |.|.|...
 Worm   586 ICL----EWYLTDNDAVIYSSCISQKTKPFKTVMQSLNA-KLAIALIIILIIVVVFCCDTCIHQK 645

  Fly   715 IVFIAASRRSRKLQSS 730
            :.:.:..:::.|:|.|
 Worm   646 VAYFSRIKKNAKMQQS 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hafNP_001356954.1 leucine-rich repeat 86..105 CDD:275380 4/18 (22%)
LRR 103..>344 CDD:443914 58/245 (24%)
leucine-rich repeat 106..129 CDD:275380 5/22 (23%)
leucine-rich repeat 131..154 CDD:275380 3/22 (14%)
leucine-rich repeat 155..178 CDD:275380 7/22 (32%)
leucine-rich repeat 179..202 CDD:275380 5/22 (23%)
leucine-rich repeat 203..225 CDD:275380 5/21 (24%)
leucine-rich repeat 226..253 CDD:275380 3/26 (12%)
leucine-rich repeat 254..302 CDD:275380 17/47 (36%)
leucine-rich repeat 303..326 CDD:275380 8/23 (35%)
leucine-rich repeat 327..350 CDD:275380 1/22 (5%)
PCC 332..>413 CDD:188093 12/80 (15%)
PRK10927 <1061..>1097 CDD:236797
iglr-1NP_510491.2 LRR <102..346 CDD:443914 64/285 (22%)
leucine-rich repeat 106..128 CDD:275380 5/24 (21%)
leucine-rich repeat 129..151 CDD:275380 6/27 (22%)
leucine-rich repeat 152..175 CDD:275380 3/22 (14%)
leucine-rich repeat 176..199 CDD:275380 7/22 (32%)
leucine-rich repeat 200..223 CDD:275380 5/22 (23%)
leucine-rich repeat 224..247 CDD:275380 9/49 (18%)
leucine-rich repeat 248..270 CDD:275380 9/23 (39%)
leucine-rich repeat 271..294 CDD:275380 8/22 (36%)
leucine-rich repeat 295..316 CDD:275380 7/20 (35%)
leucine-rich repeat 320..343 CDD:275380 1/22 (5%)
Blue background indicates that the domain is not in the aligned region.

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