Sequence 1: | NP_001356954.1 | Gene: | haf / 33339 | FlyBaseID: | FBgn0261509 | Length: | 1347 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034325.2 | Gene: | Lgr5 / 14160 | MGIID: | 1341817 | Length: | 907 | Species: | Mus musculus |
Alignment Length: | 349 | Identity: | 113/349 - (32%) |
---|---|---|---|
Similarity: | 158/349 - (45%) | Gaps: | 52/349 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 LLLLLPLILGRLHVAHAQCPWQRDVP-DLQTSCICAYNLGRELSVQCDQVDFSQL---LAAMNTH 77
Fly 78 ARLKPVDLLYVNNSTISELPDAVFSNLS-LHNLQLSSCGIQRIATGAFKGQESVLRNLNLQDNLL 141
Fly 142 ADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNNVTLASNAFRGLEQSLKNL 206
Fly 207 NLKGTKQRKVP-ESIRGLKSLAFLDLSQNGIKELPGAGGIRVFDGLDALTALNLERNLIQSIGET 270
Fly 271 AFAGVRKTLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPEAAFRGNPGITLLALDGN 335
Fly 336 PLSSVPEGAFAHLNATLRGLSLGG 359 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
haf | NP_001356954.1 | LRR | <52..>252 | CDD:227223 | 59/204 (29%) |
leucine-rich repeat | 86..105 | CDD:275380 | 6/18 (33%) | ||
leucine-rich repeat | 106..129 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 131..189 | CDD:338972 | 26/57 (46%) | ||
leucine-rich repeat | 131..154 | CDD:275380 | 12/22 (55%) | ||
leucine-rich repeat | 155..178 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 179..202 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 203..225 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 226..253 | CDD:275380 | 6/26 (23%) | ||
LRR_8 | 254..337 | CDD:338972 | 31/82 (38%) | ||
leucine-rich repeat | 254..302 | CDD:275380 | 19/47 (40%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 327..350 | CDD:275380 | 7/22 (32%) | ||
PCC | 332..>413 | CDD:188093 | 12/28 (43%) | ||
PRK10927 | <1061..>1097 | CDD:236797 | |||
Lgr5 | NP_034325.2 | LRRNT | 33..70 | CDD:214470 | 8/36 (22%) |
leucine-rich repeat | 68..91 | CDD:275380 | 8/30 (27%) | ||
LRR_RI | 88..386 | CDD:238064 | 89/259 (34%) | ||
LRR_8 | 92..150 | CDD:290566 | 25/58 (43%) | ||
leucine-rich repeat | 92..115 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 116..139 | CDD:275380 | 12/22 (55%) | ||
LRR_8 | 138..198 | CDD:290566 | 22/83 (27%) | ||
leucine-rich repeat | 140..163 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 164..187 | CDD:275380 | 10/46 (22%) | ||
LRR_8 | 188..246 | CDD:290566 | 19/62 (31%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 6/26 (23%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 236..258 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 257..314 | CDD:290566 | 22/57 (39%) | ||
leucine-rich repeat | 259..282 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 283..304 | CDD:275380 | 5/20 (25%) | ||
LRR_8 | 352..410 | CDD:290566 | |||
leucine-rich repeat | 354..375 | CDD:275378 | |||
leucine-rich repeat | 376..389 | CDD:275378 | |||
leucine-rich repeat | 400..423 | CDD:275378 | |||
leucine-rich repeat | 445..467 | CDD:275378 | |||
7tm_1 | 575..820 | CDD:278431 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |