DRSC/TRiP Functional Genomics Resources

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Protein Alignment haf and LOC101730428

DIOPT Version :9

Sequence 1:NP_001356954.1 Gene:haf / 33339 FlyBaseID:FBgn0261509 Length:1347 Species:Drosophila melanogaster
Sequence 2:XP_004919457.2 Gene:LOC101730428 / 101730428 -ID:- Length:970 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hafNP_001356954.1 LRR <52..>252 CDD:227223
leucine-rich repeat 86..105 CDD:275380
leucine-rich repeat 106..129 CDD:275380
LRR_8 131..189 CDD:338972
leucine-rich repeat 131..154 CDD:275380
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..202 CDD:275380
leucine-rich repeat 203..225 CDD:275380
leucine-rich repeat 226..253 CDD:275380
LRR_8 254..337 CDD:338972
leucine-rich repeat 254..302 CDD:275380
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380
PCC 332..>413 CDD:188093
PRK10927 <1061..>1097 CDD:236797
LOC101730428XP_004919457.2 leucine-rich repeat 56..77 CDD:275380
leucine-rich repeat 78..93 CDD:275380
PPP1R42 85..227 CDD:411060
leucine-rich repeat 99..120 CDD:275380
LRR_8 119..179 CDD:404697
leucine-rich repeat 121..144 CDD:275380
leucine-rich repeat 145..168 CDD:275380
leucine-rich repeat 169..192 CDD:275380
leucine-rich repeat 193..216 CDD:275380
LRRCT 225..278 CDD:214507
PRK15370 <501..>677 CDD:185268
leucine-rich repeat 507..526 CDD:275380
leucine-rich repeat 528..543 CDD:275380
leucine-rich repeat 549..570 CDD:275380
leucine-rich repeat 571..594 CDD:275380
leucine-rich repeat 595..618 CDD:275380
leucine-rich repeat 619..642 CDD:275380
leucine-rich repeat 643..666 CDD:275380
TPKR_C2 675..728 CDD:417692
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24366
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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