DRSC/TRiP Functional Genomics Resources

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Protein Alignment haf and Islr2

DIOPT Version :10

Sequence 1:NP_001356954.1 Gene:haf / 33339 FlyBaseID:FBgn0261509 Length:1347 Species:Drosophila melanogaster
Sequence 2:NP_001386356.1 Gene:Islr2 / 100910729 RGDID:6497037 Length:746 Species:Rattus norvegicus


Alignment Length:509 Identity:115/509 - (22%)
Similarity:178/509 - (34%) Gaps:114/509 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 RKVPESIRGLKSLAFLDLSQNGIKEL-PGAGGIRVFDGLDALTALNLERNLIQSIGETAFAGVRK 277
            |:|||.:..  ::..|.||.|.|..| .||     |..:..:|:|.|..:.::::...|.| |..
  Rat    44 REVPEGLPA--NVTTLSLSANKITVLRRGA-----FVNVTQVTSLWLAHSEVRTVESGALA-VLS 100

  Fly   278 TLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPEAAFRGNPGITLLALDGNPLSSVPE 342
            .|.:|.|.:||::.||...:.:|..|::|.:..|.|.|||..|....|.:..|.::.|.|.::..
  Rat   101 QLKNLDLSHNLISNFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLEP 165

  Fly   343 GAFAHLNATLRGLSLGGRFLHCDCKLRWVAEWIRNGDLQVTSRERNPQFCGTPPRFRDRGFYSIQ 407
            |.|..|:| |..|.|.....||.|.|.|:..|.  ...:|:..|.:...|.:||..:....:.: 
  Rat   166 GTFDALSA-LSHLQLYHNPFHCSCGLVWLQAWA--ASTRVSLPEPDSIACASPPELQGVPVHRL- 226

  Fly   408 PEELSC------------PDIADAALRG------------------------PVGLADNLKPTLP 436
             ..|.|            |:.....||.                        |.|....:.|.|.
  Rat   227 -PALPCAPPSVRLSAEPPPEAPGTPLRAGLSFLLHCVAEGHPTPRLQWQLQIPGGTVVLVPPVLS 290

  Fly   437 SSPDSVE-YETGTGTGTVGTGTAASAPVTSSVSSSTSTTTPTTTTTTTTAEPTTRRSTTRPPTKS 500
            ...|..| .:.|.|.|.....|...||            |||..........|.|.......:..
  Rat   291 KEEDGGEKVDDGEGDGDEDQPTQTEAP------------TPTPAPAWPAPPATPRFLALANGSLL 343

  Fly   501 TTTISATTASPASNPPVNGTGTVQATS--ITTSSSSSSSSSTSTGHGNGKQAP-GWRQGVTNGNG 562
            ...:||..|...:....|..|| .:||  :|.:::.....:..||.....||| ..|:..|.|..
  Rat   344 VPLLSAKEAGIYTCRAHNELGT-NSTSLRVTVAAAGPPKHAPGTGEEPDAQAPTSERKATTKGRS 407

  Fly   563 NSGVGGAGGLHKPQRPPLVLGYPPQRGTRIDDANEVQVKHAFRQDSSVIIQWDSDTANILGFRVV 627
            ||                ||.:.|:..|:......|.:......:..     ::|....:|.::.
  Rat   408 NS----------------VLPFKPEGKTKGQGLARVSILGETEAELE-----ETDEEEQMGGQIP 451

  Fly   628 YRLFGEKAFKQGPP--------------------------LESSEREFKIKNVP 655
            ....|||....|.|                          |:.:|||.:::..|
  Rat   452 ADPMGEKHCGHGDPSRYVSNHAFNQSSDLKPHVFELGVIALDVAEREARVQLTP 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hafNP_001356954.1 leucine-rich repeat 86..105 CDD:275380
LRR 103..>344 CDD:443914 39/130 (30%)
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 131..154 CDD:275380
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..202 CDD:275380
leucine-rich repeat 203..225 CDD:275380 4/10 (40%)
leucine-rich repeat 226..253 CDD:275380 9/27 (33%)
leucine-rich repeat 254..302 CDD:275380 14/47 (30%)
leucine-rich repeat 303..326 CDD:275380 8/22 (36%)
leucine-rich repeat 327..350 CDD:275380 6/22 (27%)
PCC 332..>413 CDD:188093 21/80 (26%)
PRK10927 <1061..>1097 CDD:236797
Islr2NP_001386356.1 leucine-rich repeat 37..53 CDD:275380 4/10 (40%)
LRR <52..>184 CDD:443914 42/140 (30%)
leucine-rich repeat 54..77 CDD:275380 9/27 (33%)
leucine-rich repeat 78..101 CDD:275380 6/23 (26%)
leucine-rich repeat 102..125 CDD:275380 8/22 (36%)
leucine-rich repeat 126..149 CDD:275380 8/22 (36%)
leucine-rich repeat 150..173 CDD:275380 6/22 (27%)
PCC 155..>229 CDD:188093 20/78 (26%)
Ig 249..374 CDD:472250 27/137 (20%)
Ig strand B 257..261 CDD:409353 0/3 (0%)
Ig strand C 270..277 CDD:409353 0/6 (0%)
Ig strand E 340..344 CDD:409353 0/3 (0%)
Ig strand F 354..359 CDD:409353 0/4 (0%)
Ig strand G 367..370 CDD:409353 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

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