| Sequence 1: | NP_001356954.1 | Gene: | haf / 33339 | FlyBaseID: | FBgn0261509 | Length: | 1347 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017951401.1 | Gene: | rtn4rl2 / 100498486 | XenbaseID: | XB-GENE-6036061 | Length: | 396 | Species: | Xenopus tropicalis |
| Alignment Length: | 402 | Identity: | 115/402 - (28%) |
|---|---|---|---|
| Similarity: | 167/402 - (41%) | Gaps: | 65/402 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 82 PVDLLYVNNSTISELPDAVFSNLSLHNL----------QLSSCGIQRIATGAFKGQESVLRNLNL 136
Fly 137 QDNLLADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNN--VTLASNAFRGL 199
Fly 200 EQSLKNLNLKGTKQRKVPESI-RGLKSLAFLDLSQNGIKELPGAGGIRVFDGLDALTALNLERNL 263
Fly 264 IQSIGETAFAGVRKTLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPEAAFRGNPGIT 328
Fly 329 LLALDGNPLSSVPEGAFAHLNATLRGLSLGGRFLHCDCKLRWVAEWIRNGDLQVTSRERNPQFCG 393
Fly 394 TPPRFRDRGFYSIQPEELSCPDIADAALRGPVGLADNLKPTLPSS------PDSVEYETGTGTGT 452
Fly 453 V----GTGTAAS 460 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| haf | NP_001356954.1 | LRR | <52..>252 | CDD:227223 | 53/182 (29%) |
| leucine-rich repeat | 86..105 | CDD:275380 | 5/18 (28%) | ||
| leucine-rich repeat | 106..129 | CDD:275380 | 4/32 (13%) | ||
| LRR_8 | 131..189 | CDD:338972 | 18/59 (31%) | ||
| leucine-rich repeat | 131..154 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 155..178 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 179..202 | CDD:275380 | 9/24 (38%) | ||
| leucine-rich repeat | 203..225 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 226..253 | CDD:275380 | 8/26 (31%) | ||
| LRR_8 | 254..337 | CDD:338972 | 27/82 (33%) | ||
| leucine-rich repeat | 254..302 | CDD:275380 | 17/47 (36%) | ||
| leucine-rich repeat | 303..326 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 327..350 | CDD:275380 | 7/22 (32%) | ||
| PCC | 332..>413 | CDD:188093 | 20/80 (25%) | ||
| PRK10927 | <1061..>1097 | CDD:236797 | |||
| rtn4rl2 | XP_017951401.1 | PLN00113 | 46..>268 | CDD:215061 | 77/255 (30%) |
| leucine-rich repeat | 69..92 | CDD:275380 | 6/25 (24%) | ||
| leucine-rich repeat | 93..114 | CDD:275380 | 8/20 (40%) | ||
| leucine-rich repeat | 115..139 | CDD:275380 | 9/24 (38%) | ||
| leucine-rich repeat | 140..163 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 163..222 | CDD:338972 | 27/87 (31%) | ||
| leucine-rich repeat | 164..187 | CDD:275380 | 8/26 (31%) | ||
| leucine-rich repeat | 188..211 | CDD:275380 | 11/29 (38%) | ||
| leucine-rich repeat | 212..235 | CDD:275380 | 11/40 (28%) | ||
| leucine-rich repeat | 236..259 | CDD:275380 | 7/23 (30%) | ||
| TPKR_C2 | 268..310 | CDD:387596 | 11/45 (24%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||