Sequence 1: | NP_001356954.1 | Gene: | haf / 33339 | FlyBaseID: | FBgn0261509 | Length: | 1347 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002938412.1 | Gene: | lrig1 / 100491453 | XenbaseID: | XB-GENE-494193 | Length: | 1043 | Species: | Xenopus tropicalis |
Alignment Length: | 866 | Identity: | 198/866 - (22%) |
---|---|---|---|
Similarity: | 306/866 - (35%) | Gaps: | 209/866 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 LPAATTPLLLLLPLILGRLHVAHAQCPWQRDV----------PDLQTSC--ICAYNLGRELSVQC 62
Fly 63 DQVDFSQLLAAMNTHARLKPVDLLYVNNSTISELPDAVF-SNLSLHNLQLSSCGIQRIATGAFKG 126
Fly 127 QESVLRNLNLQDNLLADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNNVT- 190
Fly 191 LASNAFRGLEQSLKNLNLKGTKQRKVPE-SIRGLKSLAFLDLSQNGIKELPGAGG---------- 244
Fly 245 ------IRVFDG----LDALTALNLERNLIQSIGETAFAGVRKTLSSLSLLNNLLA---EFPIGA 296
Fly 297 VHSLKELRVLDIGFNLLTSLPEAAFRGNPGITLLALDGNPLSSVPEGAFAHLNATLRGLSLGGRF 361
Fly 362 LHCDCKLRWVAEWIRNGDLQVTSRERNPQFCGTPPRFRDRGFYSIQPEELSCPDIADAALRGPVG 426
Fly 427 LADNLKPTLPSSPDSVEYETGTGTG-TVGTGTAASAPVT---------------SSVSSSTSTTT 475
Fly 476 PTTTTTTTTAEPTTRRSTTRPPTKSTTTISATTASPASNPPVNGTGTVQATSITTSSSSSSSSST 540
Fly 541 -------STGH---------GNGKQAPGWRQ----------------------GV---TNGNGNS 564
Fly 565 GVGGAGGLHKPQRPPLV--------------------LGYPPQRGTRI--DDANEVQVKHAFRQD 607
Fly 608 SSVII----------QWDSDTANILGFRVVYR---------LFGEKAFKQGPPLESSEREFKIKN 653
Fly 654 VPAQECII-------VCVI-------------SLEELHVTPETVPYQQ----CREVRTV------ 688
Fly 689 ASQASNMDKITIAASAAICGT 709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
haf | NP_001356954.1 | LRR | <52..>252 | CDD:227223 | 60/222 (27%) |
leucine-rich repeat | 86..105 | CDD:275380 | 2/19 (11%) | ||
leucine-rich repeat | 106..129 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 131..189 | CDD:338972 | 20/57 (35%) | ||
leucine-rich repeat | 131..154 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 155..178 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 179..202 | CDD:275380 | 11/23 (48%) | ||
leucine-rich repeat | 203..225 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 226..253 | CDD:275380 | 11/46 (24%) | ||
LRR_8 | 254..337 | CDD:338972 | 29/85 (34%) | ||
leucine-rich repeat | 254..302 | CDD:275380 | 19/50 (38%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 327..350 | CDD:275380 | 8/22 (36%) | ||
PCC | 332..>413 | CDD:188093 | 22/80 (28%) | ||
PRK10927 | <1061..>1097 | CDD:236797 | |||
lrig1 | XP_002938412.1 | LRRNT | 28..59 | CDD:214470 | 4/5 (80%) |
leucine-rich repeat | 57..80 | CDD:275378 | 6/22 (27%) | ||
PLN00113 | <58..>370 | CDD:215061 | 91/324 (28%) | ||
leucine-rich repeat | 104..127 | CDD:275380 | 5/29 (17%) | ||
leucine-rich repeat | 128..151 | CDD:275380 | 5/25 (20%) | ||
leucine-rich repeat | 152..199 | CDD:275380 | 13/47 (28%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 224..247 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 248..295 | CDD:275380 | 15/46 (33%) | ||
leucine-rich repeat | 272..292 | CDD:275380 | 8/19 (42%) | ||
leucine-rich repeat | 296..319 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 320..343 | CDD:275380 | 10/23 (43%) | ||
LRR_8 | 343..405 | CDD:338972 | 18/61 (30%) | ||
leucine-rich repeat | 344..370 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 371..394 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 395..413 | CDD:275380 | 6/17 (35%) | ||
LRRCT | 429..477 | CDD:214507 | 12/51 (24%) | ||
leucine-rich repeat | 445..471 | CDD:275380 | 5/29 (17%) | ||
IG | 488..582 | CDD:214652 | 14/97 (14%) | ||
Ig_1 | 603..677 | CDD:143240 | 11/73 (15%) | ||
I-set | 680..759 | CDD:369462 | 14/78 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |