DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31935 and RAB3GAP1

DIOPT Version :9

Sequence 1:NP_608608.2 Gene:CG31935 / 33338 FlyBaseID:FBgn0051935 Length:916 Species:Drosophila melanogaster
Sequence 2:XP_011509125.1 Gene:RAB3GAP1 / 22930 HGNCID:17063 Length:1024 Species:Homo sapiens


Alignment Length:1039 Identity:310/1039 - (29%)
Similarity:480/1039 - (46%) Gaps:211/1039 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIDDNEFYRENFSADSDWEVFNAQLGEILQKWDVSSDSETRNLKSEEIFSCNWKVEREKLDMLRN 68
            |.:...|...:|:..|:||.|.:::.|:|..|.:..:|..:.|:.....|..|:.:.:::.....
Human     6 EPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEEKSDEISFADF 70

  Fly    69 GIEVEYHQAILE--DEELVRAEAKEITCLQRTSCHHDLMSTGNSFGPPIRSSQELHILARIYGLR 131
            ...|.:|..:.|  |:| .:.|..|....|..   .||:...|.|.|      ..|.|.|.||||
Human    71 KFSVTHHYLVQESTDKE-GKDELLEDVVPQSM---QDLLGMNNDFPP------RAHCLVRWYGLR 125

  Fly   132 RFIVLHPVNPTLNYMRSTSEFNFFLSAVAVVSAEVQSLVPIFVQIYDPKW-NYYTGVALAPALRT 195
            .|:|:.|...: :.:.|.|:.|..||:|::........||:||||:. || ..|.|....|.:||
Human   126 EFVVIAPAAHS-DAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHH-KWRRMYVGECQGPGVRT 188

  Fly   196 NFRLIGLEKAPPECRFLMGLLTLFREKVPTSYTQAAMISVCT--TYAL-DTMRIRMPMYVPFDHG 257
            :|.::.|.|.|.:...|.|||.:|:.|:....|....:|:..  ||.| |..:...|...|    
Human   189 DFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQQYFWPQQPP---- 249

  Fly   258 LSSEDIVVDGEVSHLEVQQFCALPHGYKPESRTEIYLVYTWPELSEHVAFDSEQRSDFVPAKAPL 322
              ..|.:|.|||..||   |..||.|...:..:|::|..|||.|:|.:..|::..||..|.:||.
Human   250 --DIDALVGGEVGGLE---FGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYSDLDPIQAPH 309

  Fly   323 GKIYLSVEASSYLSCCLRDYQS----VAEVTRSLESFVGRNFSGTSSGAEAA--SNPLDRITE-- 379
            ..:  .|..:....|.|.|:.:    :.....|.:..:||: :....|.|.|  ::.|.::||  
Human   310 WSV--RVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRS-AFEEEGKETADITHALSKLTEPA 371

  Fly   380 ----HKLTK-----------RRERSFELPSQAGLTKRLPGPMTESELSELLAYLFPDMHPEMALF 429
                |||:.           |:.|..|           ..|:....|:.:|.:||||...|.   
Human   372 SVPIHKLSVSNMVHTAKKKIRKHRGVE-----------ESPLNNDVLNTILLFLFPDAVSEK--- 422

  Fly   430 PYAKKNFTDKFDP----------MRIKSAVPDSLVCRLSCLLATCHAHLGSVEGMAQVWAAFTRQ 484
            |......||..:|          .:.|||..|||..:|:..|...:.:.|.::|:|.:|..|..:
Human   423 PLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLE 487

  Fly   485 LRLLWDNSLMVPGISAGFPDTRTCLLHQKLQMLNVCVERRVQREANSKRKSE-------GMVGKA 542
            :|..|:|:.::||:::|.||.|.|||||||||||.|:||:..|:...|..:.       |..|||
Human   488 MRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASDVTNIYPGDAGKA 552

  Fly   543 SSE------EEEDED------------DDEGEFFDC----DDLTAGA------GSPTKAVLSLKP 579
            ..:      :|.|::            |.|.|||:|    ::|....      |.| |.:.:|:|
Human   553 GDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQESGKKGGP-KEMANLRP 616

  Fly   580 EGRLRRLNNERLLEEPDEYLYIPDTQEPVPKTEDQLQDDAEVMLKLG---PGSGLTTQMMCTSLL 641
            ||||.:.....||.. .|.||||.||||.|.|||.|::.:||:.|||   .|:.|..:|....||
Human   617 EGRLYQHGKLTLLHN-GEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACLL 680

  Fly   642 SDMEAFKAANPRGIMEDFIRWYSPKDW--EEVTDELGQV--KHQLSIRMTTEGNTWQKVWEQAQA 702
            ||||:||||||...:|||:|||||:|:  |||.||.|.|  |.:||.||....|.|.:.||.|:.
Human   681 SDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVVLKGELSARMKIPSNMWVEAWETAKP 745

  Fly   703 VPVSRQKRLFDDTNEALKVLHYLETRKMHEIYNLTVIPLLHSAILKLADILSNAELEDLFSSQIE 767
            :|..||:||||||.||.||||||..:|..::....:..::|:|:||:.:   ...||::  |.::
Human   746 IPARRQRRLFDDTREAEKVLHYLAIQKPADLARHLLPCVIHAAVLKVKE---EESLENI--SSVK 805

  Fly   768 KLLSDLCRLSRSHSD------------------ELPSIKPLLDDLAELERRFYQFKCFERLSGYP 814
            |::..:.    |||.                  ::.:::.|:.....|:.:|...||.:.    .
Human   806 KIIKQII----SHSSKVLHFPNPEDKKLEEIIHQITNVEALIARARSLKAKFGTEKCEQE----E 862

  Fly   815 KRSSLQQ---VKLQFEEILRNDNCCTIVNRRLTAAGDG----TLYDILI----------PKLE-- 860
            ::..|::   ..|:..|:|            :|.||.|    .::.:.:          |:.|  
Human   863 EKEDLERFVSCLLEQPEVL------------VTGAGRGHAGRIIHKLFVNAQRAAAMTPPEEELK 915

  Fly   861 -----EDMADRLIS-------KDYIIRLDGDTKTT-------EKGLYLGPQFMRAIVTGEKLRL 905
                 |:.....:|       :::|:|      ||       .|.|   ||.|.:::|.|..||
Human   916 RMGSPEERRQNSVSDFPPPAGREFILR------TTVPRPAPYSKAL---PQRMYSVLTKEDFRL 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31935NP_608608.2 Rab3-GTPase_cat 578..726 CDD:290601 83/154 (54%)
RAB3GAP1XP_011509125.1 Rab3-GTPase_cat 612..769 CDD:290601 84/157 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146994
Domainoid 1 1.000 214 1.000 Domainoid score I2744
eggNOG 1 0.900 - - E1_KOG2390
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45617
Inparanoid 1 1.050 367 1.000 Inparanoid score I2157
Isobase 1 0.950 - 0 Normalized mean entropy S6808
OMA 1 1.010 - - QHG59936
OrthoDB 1 1.010 - - D105289at33208
OrthoFinder 1 1.000 - - FOG0005064
OrthoInspector 1 1.000 - - oto89906
orthoMCL 1 0.900 - - OOG6_103581
Panther 1 1.100 - - LDO PTHR21422
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2744
SonicParanoid 1 1.000 - - X3584
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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