DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31935 and Rab3gap1

DIOPT Version :9

Sequence 1:NP_608608.2 Gene:CG31935 / 33338 FlyBaseID:FBgn0051935 Length:916 Species:Drosophila melanogaster
Sequence 2:XP_006529468.1 Gene:Rab3gap1 / 226407 MGIID:2445001 Length:988 Species:Mus musculus


Alignment Length:1042 Identity:317/1042 - (30%)
Similarity:485/1042 - (46%) Gaps:190/1042 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIDDNEFYRENFSADSDWEVFNAQLGEILQKWDVSSDSETRNLKSEEIFSCNWKVEREKLDMLRN 68
            |.:...|...:|:..|:||.|.:::.|:|..|.:...|..:.|:.....|..|:...:::.....
Mouse     6 EPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGPSLGKPLEKGIFTSGTWEERSDEISFADF 70

  Fly    69 GIEVEYHQAILE-------DEELVRAEAKEITCLQRTSCHHDLMSTGNSFGPPIRSSQELHILAR 126
            ...|.:|..:.|       ||||..|..:.:         .||:...|.|.|      ..|.|.|
Mouse    71 RFSVTHHYLVQESPDKERKDEELEDAIPQSM---------QDLLCMNNDFPP------RAHCLVR 120

  Fly   127 IYGLRRFIVLHPVNPTLNYMRSTSEFNFFLSAVAVVSAEVQSLVPIFVQIYDPKW-NYYTGVALA 190
            .||||.|:|:.|...: :.:.|.|:.|..||::::........||:||||:. || ..|.|....
Mouse   121 WYGLREFVVIAPAAHS-DAVLSESKCNLLLSSISIALGNTGCQVPLFVQIHH-KWRRMYMGECQG 183

  Fly   191 PALRTNFRLIGLEKAPPECRFLMGLLTLFREKV--PTSYTQAAMISVCTTYAL-DTMRIRMPMYV 252
            |.:||:|.::.|.|.|.:...|.|||.:|:.|:  |.:......|::..||.| |..:...|...
Mouse   184 PGVRTDFEMVHLRKVPSQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRLTYVLQDWQQYFWPQQP 248

  Fly   253 PFDHGLSSEDIVVDGEVSHLEVQQFCALPHGYKPESRTEIYLVYTWPELSEHVAFDSEQRSDFVP 317
            |      ..|.:|.|||..||   |..||.|...:..:|::|..|||.|:|.:..|::..||..|
Mouse   249 P------DIDALVGGEVGGLE---FGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYSDLDP 304

  Fly   318 AKAPLGKIYLSVEASSYLSCCLRDYQS----VAEVTRSLESFVGRNFSGTSSGAEAA--SNPLDR 376
            .:||...:  .|..:....|.|.|:.:    :.....|.:..:||: :....|.|.|  ::.|.:
Mouse   305 VQAPHWSV--RVRKADNPQCLLGDFVTEFLKICRRKESTDEILGRS-TFEEEGREVADITHALSK 366

  Fly   377 ITE------HKLTK-----------RRERSFELPSQAGLTKRLPGPMTESELSELLAYLFPDMHP 424
            :||      |||:.           |:.|..|            .|:....|:.:|.:||||...
Mouse   367 LTEPAPVPIHKLSVSNMVHTAKKKIRKHRGEE------------SPLNSDVLNTILLFLFPDAVS 419

  Fly   425 EMALFPYAKKNFTDKFDPM----------RIKSAVPDSLVCRLSCLLATCHAHLGSVEGMAQVWA 479
            |.   |.......|...|.          :.|||..|||..:|:..|...:.:.|.::|:|.:|.
Mouse   420 EK---PLDGTTSIDNSIPAPEAGDYTLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQ 481

  Fly   480 AFTRQLRLLWDNSLMVPGISAGFPDTRTCLLHQKLQMLNVCVERRVQREANSKR----------- 533
            .|..::|..|:|:.::||:::|.||.|.|||||||||||.|:||:..|:...|.           
Mouse   482 EFVLEMRFRWENNFLIPGLASGSPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSLSDSTTSAYP 546

  Fly   534 ----KSEGMVG---KASSEEEEDE--------DDDEGEFFDC----DDLTAGA------GSPTKA 573
                |:.|.:|   ...:|:|:.|        .|.|.|||:|    :||....      |.| |.
Mouse   547 GDAGKTGGQLGLDHLRDTEKEKGEVGKSWDSWSDSEEEFFECLSDTEDLKGNGQESGKKGGP-KE 610

  Fly   574 VLSLKPEGRLRRLNNERLLEEPDEYLYIPDTQEPVPKTEDQLQDDAEVMLKLG---PGSGLTTQM 635
            :.:|||||||.:.....||.. .|.||||.||||.|.|||.|::.:||:.|||   .|:.|..:|
Mouse   611 MANLKPEGRLHQHGKLTLLHN-GEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARM 674

  Fly   636 MCTSLLSDMEAFKAANPRGIMEDFIRWYSPKDW--EEVTDELGQV--KHQLSIRMTTEGNTWQKV 696
            ....||||||:||||||...:|||:|||||:|:  ||||||.|.|  |.:||.||....|.|.:.
Mouse   675 QSACLLSDMESFKAANPGCFLEDFVRWYSPRDYIEEEVTDEKGNVVLKGELSARMKIPSNMWVEA 739

  Fly   697 WEQAQAVPVSRQKRLFDDTNEALKVLHYLETRKMHEIYNLTVIPLLHSAILKLADILSNAELEDL 761
            ||.|:.||..||:||||||.||.||||||..:|..::....:..::|:|:||:.:   ...||::
Mouse   740 WETAKPVPARRQRRLFDDTREAEKVLHYLAMQKPADLARHLLPCVIHAAVLKVKE---EESLENI 801

  Fly   762 FSSQIEKLLSDLCRLSRSHSD------------------ELPSIKPLLDDLAELERRFYQFKC-- 806
            .|  ::|::..:.    :||.                  ::.:::.::.....|:.:|...||  
Mouse   802 PS--VKKIIKQII----AHSSKVLHFPNPEDKKLEEIILQITTVEAIIARARSLKAKFGTEKCEH 860

  Fly   807 FERLSGYPKRSS--LQQVKLQFEEILRNDNCCTIVNR------RLTAAGDGTLYDILIPKLE--- 860
            .|...|..:..|  |:|.::......|. :...|:::      |||.:.|... .:.:|:.|   
Mouse   861 EEEKEGLERFVSCLLEQPEVSVTGAGRG-HAGRIIHKLFVNAQRLTESSDEAA-AVALPEEELKK 923

  Fly   861 ----EDMADRLIS-------KDYIIRLDGDTKTT-EKGLYLGPQFMRAIVTGEKLRLCGAFTEST 913
                |:....|:|       ::.|:|........ .|.|   ||.|.:::|.|..||.|||:..|
Mouse   924 SGCPEERRQTLVSDFPPPAGRELILRATVPRPAPYSKAL---PQRMYSVLTKEDFRLAGAFSSDT 985

  Fly   914 AF 915
            :|
Mouse   986 SF 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31935NP_608608.2 Rab3-GTPase_cat 578..726 CDD:290601 86/154 (56%)
Rab3gap1XP_006529468.1 Rab3-GTPase_cat 612..769 CDD:372788 87/157 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836937
Domainoid 1 1.000 211 1.000 Domainoid score I2807
eggNOG 1 0.900 - - E1_KOG2390
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45617
Inparanoid 1 1.050 369 1.000 Inparanoid score I2129
Isobase 1 0.950 - 0 Normalized mean entropy S6808
OMA 1 1.010 - - QHG59936
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005064
OrthoInspector 1 1.000 - - oto93483
orthoMCL 1 0.900 - - OOG6_103581
Panther 1 1.100 - - LDO PTHR21422
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2744
SonicParanoid 1 1.000 - - X3584
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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