DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31935 and rab3gap1

DIOPT Version :9

Sequence 1:NP_608608.2 Gene:CG31935 / 33338 FlyBaseID:FBgn0051935 Length:916 Species:Drosophila melanogaster
Sequence 2:XP_031748799.1 Gene:rab3gap1 / 100488581 XenbaseID:XB-GENE-995561 Length:975 Species:Xenopus tropicalis


Alignment Length:1036 Identity:315/1036 - (30%)
Similarity:490/1036 - (47%) Gaps:183/1036 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEEID-DNEFYR-ENFSADSDWEVFNAQLGEILQKWDVSSDSETRNLKSEEIFSCNWKVEREKL 63
            ||.:.| ::|.:. .:|:..|:||.|.:::.|:|.:|.:..::..:..:..|..|..|:.:.:::
 Frog     1 MAADSDPESEVFEITDFTTASEWERFISRVEEVLNEWKLIGETSNKPPEKGEYTSGVWEEKGDEI 65

  Fly    64 DMLRNGIEVEYHQAILEDEELVRAEAKEITCLQRTSCHHDLMSTGNSFGPPIRSSQELHILARIY 128
            ........:.:|..:.|..|  |.|.::........|..||:.|.|.| ||:     .|.|.|.|
 Frog    66 LFADFRFSIRHHYLVQEAGE--REETEDTGEDSIPVCMQDLLCTNNDF-PPV-----AHCLVRWY 122

  Fly   129 GLRRFIVLHPVNPTLNYMRSTSEFNFFLSAVAVVSAEVQSLVPIFVQIYDPKW-NYYTGVALAPA 192
            |||.|:|:.|.  ..:.:.|.|:.|..||:|::........||:|:|::. || ..|.|....|.
 Frog   123 GLREFVVISPA--ANDAVISESKCNLLLSSVSIALGNTGCQVPLFIQVHQ-KWRKLYVGECQGPG 184

  Fly   193 LRTNFRLIGLEKAPPECRFLMGLLTLFREKV--PTSYTQAAMISVCTTYAL-DTMRIRMPMYVPF 254
            :||:|.::.|.|.|.:...|.|||.:|:.|:  |.:......|::..||.| |..:...|...| 
 Frog   185 VRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTALPPVNIAIRFTYILQDWQQYFWPQQPP- 248

  Fly   255 DHGLSSEDIVVDGEVSHLEVQQFCALPHGYKPESRTEIYLVYTWPELSEHVAFDSEQRSDFVPAK 319
                 ..|.::.||:..||:.:   ||.|...:...|::|..|||.|:|.:..|::..||..|.:
 Frog   249 -----DLDALIGGEIGGLEIGK---LPFGACEDPICELHLATTWPCLTEGIIVDNDVYSDLDPLQ 305

  Fly   320 APLGKIYLSVEASSYLSCCLRDYQSVAEVTR------SLESFVGRNFSGTSSGAEAA--SNPLDR 376
            ||...:  .|..:....|.|.|:  |:|..|      |.:..:|:: :...:|.|.|  |..|.:
 Frog   306 APQWSV--RVRKADNPQCMLGDF--VSEFFRLCRRKESTDELLGKS-TFEENGKEVADISQALSK 365

  Fly   377 ITE------HKLTK-----------RRERSFELPSQAGLTKRLPGPMTESELSELLAYLFPD--- 421
            :||      |||:.           |:.|..:           ..|:....|:.:|.:||||   
 Frog   366 LTEPAPVPIHKLSVTSMVHSARKKIRKHRGAD-----------ESPLNNDVLNAILFFLFPDAKS 419

  Fly   422 MHPEMALFPYAKKNFTDKFDP------MRIKSAVPDSLVCRLSCLLATCHAHLGSVEGMAQVWAA 480
            :....|....:..|.:.:.:.      .::|||..|||..:|:..|...:.:.|.|:|:|.:|..
 Frog   420 LDGSEAKASTSTGNISSQSESEDYNLYSQLKSAPSDSLTYKLALCLCMVNFYHGGVKGVAHLWQE 484

  Fly   481 FTRQLRLLWDNSLMVPGISAGFPDTRTCLLHQKLQMLNVCVERRVQREANSKRKSEGMVGKASSE 545
            |..::|..|:|:.::||::.|.||.:.|||||||||||.|:||:       |.:.||..|..||.
 Frog   485 FVLEMRYRWENNFLIPGLANGSPDLKCCLLHQKLQMLNCCLERK-------KGRDEGKKGSPSSS 542

  Fly   546 EE------------------------EDEDDDEGEFFDC----DDLTAG-------AGSPTKAVL 575
            |.                        :...|.|.|||:|    ::|..|       |...||...
 Frog   543 EAAANRTPSDTLSPGEANKYEVAKSWDSWSDSEDEFFECHSDTEELKEGSQESARKAKEETKENP 607

  Fly   576 SLKPEGRLRRLNNERLLE--EPDEYLYIPDTQEPVPKTEDQLQDDAEVMLKLG---PGSGLTTQM 635
            ..||||||.:..|..||.  ||   ||||.||||.|.|||.|::.:||:.|||   .|:.|..:|
 Frog   608 LPKPEGRLHQSGNLTLLRTGEP---LYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARM 669

  Fly   636 MCTSLLSDMEAFKAANPRGIMEDFIRWYSPKDW--EEVTDELGQ--VKHQLSIRMTTEGNTWQKV 696
            ....||||||:||||||...:|||:|||||:|:  |||.||.|.  ||.:||.||....|.|.:.
 Frog   670 QSACLLSDMESFKAANPGCCLEDFVRWYSPRDYIEEEVMDEKGNKIVKGELSPRMKIPNNMWVEA 734

  Fly   697 WEQAQAVPVSRQKRLFDDTNEALKVLHYLETRKMHEIYNLTVIPLLHSAILKLADILSNAELEDL 761
            ||.|:.:|..||:||||||.||.||||||..:|..::....:..::|:|:|||.:   ....||:
 Frog   735 WETAKPIPARRQRRLFDDTKEAEKVLHYLAVQKPADLTRHLLPCVIHAALLKLKE---EEAAEDV 796

  Fly   762 FSSQ--IEKLLSDLCRLSRSHSDELPSIKPLLDDLAE-------------LERRFYQFKC----- 806
            .|.:  |::::|...::.|..|   |..|.|.|.:.:             |:.:|...:|     
 Frog   797 PSGRKAIKQIISHSSKVLRFPS---PDDKKLEDVIGQMLNVEATIARARSLKAKFAVDRCEKSDE 858

  Fly   807 FERLSGYPKRSSLQQVKLQFEEILRNDNCCTIVNRRLTAAGDGTLYDILIPKLEED-----MAD- 865
            .|.|..:.. |.|:|.::......|.. ..||:::...:|...    :.:..|||:     .:| 
 Frog   859 KEDLEKFVS-SLLEQPEVPIVGAGRGP-AGTIIHKMFVSAQRA----LSLAPLEEEPKRPSSSDE 917

  Fly   866 -RLISKDY--------IIRLDGDTKTTEKGLY--LGPQFMRAIVTGEKLRLCGAFTESTAF 915
             |....|:        |:|    :.......|  |.||.|.:::|.:..||.|||:..|:|
 Frog   918 RRQTGTDFPSPAGREVILR----SSVPRPAPYSKLLPQRMYSVLTKDDFRLAGAFSSDTSF 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31935NP_608608.2 Rab3-GTPase_cat 578..726 CDD:290601 86/156 (55%)
rab3gap1XP_031748799.1 Rab3-GTPase_cat 610..764 CDD:404730 86/156 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 209 1.000 Domainoid score I2798
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45617
Inparanoid 1 1.050 362 1.000 Inparanoid score I2144
OMA 1 1.010 - - QHG59936
OrthoDB 1 1.010 - - D105289at33208
OrthoFinder 1 1.000 - - FOG0005064
OrthoInspector 1 1.000 - - oto103720
Panther 1 1.100 - - LDO PTHR21422
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3584
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.080

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