DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18132 and txndc16

DIOPT Version :9

Sequence 1:NP_608603.1 Gene:CG18132 / 33333 FlyBaseID:FBgn0031345 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_685017.4 Gene:txndc16 / 556973 ZFINID:ZDB-GENE-100712-1 Length:804 Species:Danio rerio


Alignment Length:162 Identity:34/162 - (20%)
Similarity:62/162 - (38%) Gaps:24/162 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LKLRVDNFFETTEDGTF----------FVKFYEPNCMGCHDFETTWTDMAKSFKSKENICFAELN 107
            |.|.::...|.|.| ||          .|.||......|..|..::.::|::.:....:..|.::
Zfish   381 LMLDLEPVTELTAD-TFQTAIKQNEITVVLFYFKWDAVCMAFIQSYVEVAEAVEDVNGVELAAVD 444

  Fly   108 CKFAKTICNDYELRYEPN-LIWLENGEEVQQYDGDLTSPGIKIFVWEMIRRNETNKSAAK----- 166
            |.....||.|..:...|. ||:.......|.|.|.:.:..::.|:...:.....:.|::.     
Zfish   445 CGEWTDICRDQNITSFPTVLIYCPKAAAAQPYRGMMGTKSLQRFILLSLVSTPVHLSSSAEVMSF 509

  Fly   167 ------RPYFHTKPIILFGWFLYAGDV-ISYF 191
                  |.|.:..|:.:.|.|....|: :|.|
Zfish   510 LEGDLYRKYVYLTPVRVLGLFSSMQDMGVSSF 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18132NP_608603.1 Thioredoxin_like 51..151 CDD:294274 24/108 (22%)
txndc16XP_685017.4 PDI_a_family 389..489 CDD:239259 22/100 (22%)
Thioredoxin_6 530..722 CDD:290560 4/12 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0191
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.