DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18132 and tmx1

DIOPT Version :10

Sequence 1:NP_608603.1 Gene:CG18132 / 33333 FlyBaseID:FBgn0031345 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001108605.1 Gene:tmx1 / 323607 ZFINID:ZDB-GENE-030131-2327 Length:284 Species:Danio rerio


Alignment Length:107 Identity:20/107 - (18%)
Similarity:45/107 - (42%) Gaps:6/107 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LKLRVDNFFETTEDGTFFVKFYEPNCMGCHDFETTWTDMAKSFKSKENICFAELNCKFAKTICND 117
            |::..|..::....|.:.::|:.|.|..|...|..||:.| .:.....:..|:::......:...
Zfish    38 LRVLTDGDWQEVLTGEWMIEFFAPWCPACQQLEPVWTEFA-GWGDDLGVNIAKVDVTEHPGLSGR 101

  Fly   118 YELRYEPNLIWLENGEEVQQYDGDLTSPGIKIFV----WEMI 155
            :.:...|.:...::| ..::|.||.:......|:    |:.|
Zfish   102 FIIMALPTIYHCKDG-VFRRYQGDRSKEDFLSFIEEKKWQSI 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18132NP_608603.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 51..151 CDD:469754 17/97 (18%)
tmx1NP_001108605.1 PDI_a_TMX 36..136 CDD:239292 18/99 (18%)

Return to query results.
Submit another query.