DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7420 and AT5G16040

DIOPT Version :10

Sequence 1:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_197108.1 Gene:AT5G16040 / 831461 AraportID:AT5G16040 Length:396 Species:Arabidopsis thaliana


Alignment Length:396 Identity:101/396 - (25%)
Similarity:155/396 - (39%) Gaps:104/396 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VYAWGANSHGQLGLGFESELCMTPQRVAKC--SFAPAQVRLIRGGGGHVLILDTSGRIHACGWNN 65
            |.|||:...||||||.:.|     :.:|..  :..|..||.:.||..:.|.:...|::...|||.
plant     7 VIAWGSGEDGQLGLGTDEE-----KELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

  Fly    66 RGQLG---LDSTEECHSEFKMIPTEYFGDVPVETISCGWDISGAITLTKRLFVWGSNAFQQLG-- 125
            ||.||   ...||...|..|.:.....    |:....||... |:....|.:.||.|.:.|.|  
plant    67 RGTLGHPPETKTESTPSLVKSLANVKI----VQAAIGGWHCL-AVDDQGRAYAWGGNEYGQCGEE 126

  Fly   126 --ICQRGFTAVRRP--MPVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDIT 186
              ..:.| ..|||.  :|.:..::...::::.|..|..|||::..::.:|:     |.|      
plant   127 PSKDETG-RPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ-----PWP------ 179

  Fly   187 ATCLHRCNTVKIQVHNPNELRIVSISSGQNHMVLKCADLSETGGGSTKRILTLGDNKFGQSNAFQ 251
                            |.:::.:|:                     ..|:..|            
plant   180 ----------------PGDIKQISV---------------------PVRVQGL------------ 195

  Fly   252 FEEDVRQLAVGWTHNAAVLKNNEILVWGRNCYGQLGMGSFSEQQAIPTPLR----LKLPEDQGPA 312
              |:||.:|||..||.|:.::..:..||.|.|||||.|. ::.::.|.|::    |.|.:     
plant   196 --ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD-TQPRSYPIPVQGLDDLTLVD----- 252

  Fly   313 RIHMGAEHGLLRTTAGEVYTWGWNEHGNCG---NNSTENLHPNSFTTATSEIVRR------RSRI 368
             |..|..|....|..||||.||..|||..|   |:.:..:.|........|.:.:      .|..
plant   253 -IAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVA 316

  Fly   369 LLRDHR 374
            |.||.|
plant   317 LTRDGR 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7420NP_001259871.1 ATS1 3..348 CDD:444065 94/362 (26%)
AT5G16040NP_197108.1 ATS1 6..345 CDD:444065 101/396 (26%)
RCC1 320..385 CDD:395335 2/3 (67%)

Return to query results.
Submit another query.