DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7420 and Als2

DIOPT Version :10

Sequence 1:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_082993.4 Gene:Als2 / 74018 MGIID:1921268 Length:1651 Species:Mus musculus


Alignment Length:423 Identity:81/423 - (19%)
Similarity:149/423 - (35%) Gaps:140/423 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VYAWGANSHGQLGLGFESELCMTPQRVAKCSFAPAQVRLIRGGGG-----------HVLILDTSG 56
            |:.|.|.|           ..:||:|             :.|.||           |.::|...|
Mouse    20 VHVWQAGS-----------FSLTPER-------------LPGWGGKTVLQAALGVRHGVLLTEDG 60

  Fly    57 RIHACG---WNNRGQLGLDSTEECHSEFKMIPTEYFGDVPVETISCGWDISGAITLTKRLFVWGS 118
            .:::.|   |.:      :|.|.|.|. .::.:...|. .|.|::.|...|||:|.:..:::||.
Mouse    61 EVYSFGTLPWKS------ESAEICPSS-PLLESALVGH-HVITVATGSFHSGAVTESGVVYMWGE 117

  Fly   119 NAFQQLGICQRGFTAVRRPMPVKLPREEPAQ-------RISFGLRHCAVLTQDNKIYVFG----- 171
            ||..|..:..:.:  |..|.||.:...|.:.       :::.|..|...|:...:|:.:|     
Mouse   118 NAAGQCAVANQQY--VPEPSPVSISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGCQL 180

  Fly   172 -----RLRIMDPPPIE-------LDITATCLHRCNTVKIQVHNPNELRIVSISSGQNHMVLKCAD 224
                 ...:..|..:|       |.:.....|  :...:|...|.:|:.|.....|      |:.
Mouse   181 GLITTTFPVTKPQKVEHLAGRVVLQVACGAFH--SLALVQCLPPQDLKPVPERCNQ------CSQ 237

  Fly   225 LSETGGGSTKRILTLGDNKFGQSNAFQFEEDVRQLAVGWTHNAAVLKNNEILVWGRNCYGQLGMG 289
            |          ::|:.|                             |.:.:::...:|. .||: 
Mouse   238 L----------LITMTD-----------------------------KEDHVIISDSHCC-PLGV- 261

  Fly   290 SFSEQQA------IPTPLRLKLPEDQG--------PARIHMGAEHGLLRTTAGEVYTWGWNEHGN 340
            :.||.||      .|:|....| ::||        .|.::||:.    :||:|...:...|..|.
Mouse   262 TLSESQAEKHASPAPSPHPEAL-DEQGEVFENTVVEAELNMGSS----QTTSGSAISTQQNVVGT 321

  Fly   341 CGNNSTENLHPNSFTTATSEIVRRRSRILLRDH 373
            ...:|.........|.|.:..:::.|...:|::
Mouse   322 AEVSSARTAPSYPDTHAVTAYLQKLSEHSMREN 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7420NP_001259871.1 ATS1 3..348 CDD:444065 77/396 (19%)
Als2NP_082993.4 ATS1 <18..219 CDD:444065 46/234 (20%)
RCC1 1. /evidence=ECO:0000305 59..108 14/56 (25%)
RCC1 2. /evidence=ECO:0000305 109..167 13/59 (22%)
RCC1 3. /evidence=ECO:0000305 169..218 6/50 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..462
RCC1 4. /evidence=ECO:0000305 519..570
ATS1 <521..622 CDD:444065
RCC1 5. /evidence=ECO:0000305 572..621
RhoGEF 689..873 CDD:470622
PH_alsin 899..1004 CDD:241423
COG4642 <1012..1243 CDD:443680
MORN 1 1043..1065
MORN 2 1066..1088
MORN 3 1094..1116
MORN 4 1117..1139
MORN 5 1145..1167
MORN 6 1169..1191
MORN 7 1192..1214
MORN 8 1215..1238
VPS9 1546..1650 CDD:460489
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.