DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7420 and herc2

DIOPT Version :10

Sequence 1:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_073810441.1 Gene:herc2 / 558479 ZFINID:ZDB-GENE-070718-6 Length:4831 Species:Danio rerio


Alignment Length:392 Identity:86/392 - (21%)
Similarity:151/392 - (38%) Gaps:104/392 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EVYAWGANSHGQLGLGFESELCMTPQRVAKCSFAPA----QVRLIRGGGGHVLILDTSGRIHACG 62
            :|:.||.|...||| |.:......|      ||:..    .|..:.||...:..:...|:::|||
Zfish  2954 KVFVWGLNDKDQLG-GLKGSKIKVP------SFSETLSALNVVQVAGGSKSLFAVTAEGKVYACG 3011

  Fly    63 WNNRGQLGLDSTEECHSEFKMIPTEYFGDVPVE--------------TISCGWDISGAITLTKRL 113
            ....|:|||..:.              |.:|:.              .:..|...:.|:|:..::
Zfish  3012 EATNGRLGLGLSS--------------GTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 3062

  Fly   114 FVWGSNAFQQLGICQRGFTAVRRPMPVKLPREEPAQRISFGLRHCAVLTQDNKIY-----VFGRL 173
            |.||.....:||...|  ....:|..::..:.:..:.|:.|..|.|.:|...::|     .:|||
Zfish  3063 FSWGEGDDGKLGHFSR--MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRL 3125

  Fly   174 RIMDPPPIELDITATCLHRCNTVKIQVHNPNELRIVSISSGQNHMVLKCAD-----LSETGGGST 233
            .                |..||.:::.      ::|.:..|...:.:.|..     |:.|..|  
Zfish  3126 G----------------HGDNTTQLRP------KLVKVLLGHRVVQVACGSRDAQTLALTDEG-- 3166

  Fly   234 KRILTLGDNKFGQ-----SNAFQFEEDVR--------QLAVGWTHNAAVLKNNEILVWGRNCYGQ 285
             .:.:.||..||:     |......:::.        |:..|...:.|:.|:..:..||:..|.:
Zfish  3167 -MVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3230

  Fly   286 LGMGSFSEQQAIPTPLRLKLPED----QGPARIH--MGAEHGLLRTTAGEVYTWGWNEHGNCGNN 344
            ||.|         |.:.::.|:.    :|...:|  :||.|.|..|..|:|:.||.|:||..||.
Zfish  3231 LGHG---------TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNG 3286

  Fly   345 ST 346
            :|
Zfish  3287 TT 3288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7420NP_001259871.1 ATS1 3..348 CDD:444065 86/391 (22%)
herc2XP_073810441.1 None

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