DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7420 and RCBTB1

DIOPT Version :10

Sequence 1:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_060661.3 Gene:RCBTB1 / 55213 HGNCID:18243 Length:531 Species:Homo sapiens


Alignment Length:380 Identity:84/380 - (22%)
Similarity:128/380 - (33%) Gaps:146/380 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EVYAWGANSHGQLGLGFESELCMTPQRVAKCSFAPAQVR-LIRGGGGHVLILDTSGRIHACGWNN 65
            ||:.:|.|....||.| :::..:.|:::.  .....::: |..|.|.|||:....|.::|.|.|.
Human    42 EVFVFGLNYSNCLGTG-DNQSTLVPKKLE--GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103

  Fly    66 RGQLGLDSTEECHSEFKMIPTEYFGDVPVET-----------ISCGWDISGAITLTKRLFVWGSN 119
            ..|||..:|.:             |..||:.           ::||...|.|:.....:|.||.|
Human   104 YSQLGNGTTNQ-------------GIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155

  Fly   120 AFQQLGICQRGFTAVRRPMPVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELD 184
            ...|:|   .|.|| .:|.|.|:                                          
Human   156 NCGQVG---SGSTA-NQPTPRKV------------------------------------------ 174

  Fly   185 ITATCLHRCNTVKIQVHNPNELRIVSISSGQNHMVLKCADLSETGGGSTKRILTLGDNKFGQSNA 249
              ..|||    :|         |:|.|:.||                                  
Human   175 --TNCLH----IK---------RVVGIACGQ---------------------------------- 190

  Fly   250 FQFEEDVRQLAVGWTHNAAVLKNNEILVWGRNCYGQLGMGSFSEQQAIPTPLRLKLPEDQGPARI 314
                          |.:.|||.|.|:..||.|..||||:|:...|.   ||:|:.........:|
Human   191 --------------TSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL---TPVRVAALHSVCVNQI 238

  Fly   315 HMGAEHGLLRTTAGEVYTWGWNEHGNCGNNSTENLHPNSFTTATSEIVRRRSRIL 369
            ..|..|.|..|..|.:|.||.|.:|..|..:..||      .:.:.|:..:.|::
Human   239 VCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNL------LSPAHIMVEKERVV 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7420NP_001259871.1 ATS1 3..348 CDD:444065 79/356 (22%)
RCBTB1NP_060661.3 ATS1 13..311 CDD:444065 84/380 (22%)
RCC1 1 40..91 14/51 (27%)
RCC1 2 93..145 15/64 (23%)
RCC1 3 147..198 24/159 (15%)
RCC1 4 199..250 18/53 (34%)
RCC1 5 252..302 11/42 (26%)
RCC1 6 304..356
BTB_POZ_RCBTB1_CLLD7 350..466 CDD:349662
BACK_RCBTB1 466..531 CDD:350603
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.