DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7420 and Rcbtb2

DIOPT Version :10

Sequence 1:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_954515.1 Gene:Rcbtb2 / 290363 RGDID:735048 Length:551 Species:Rattus norvegicus


Alignment Length:381 Identity:83/381 - (21%)
Similarity:129/381 - (33%) Gaps:148/381 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EVYAWGANSHGQLGLG-FESEL------CMTPQRVAKCSFAPAQVRLIRGGGGHVLILDTSGRIH 59
            |::..|.|..|.||:| .:|.:      .:|.:::|..|:         |.|.|:::..|.|.: 
  Rat    66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSY---------GSGPHIVLATTDGEV- 120

  Fly    60 ACGWNNRGQLGLDSTEECHSEFKMIPTEYFGDVPVETISCGWDISGAITLTKRLFVWGSNAFQQL 124
                                                                  |.||.||:.||
  Rat   121 ------------------------------------------------------FTWGHNAYSQL 131

  Fly   125 GICQRGFTAVRRPMPVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATC 189
            |........|...:...|..::..: ::.|..|..|||.|.:::.:|                  
  Rat   132 GNGTTNHGLVPCHISTNLSNKQVIE-VACGSYHSLVLTSDGEVFAWG------------------ 177

  Fly   190 LHRCNTVKIQVHNPNELRIVSISSGQNHMVLKCADLSETGGGST------KRILTLGDNKFGQSN 248
                       :|         :|||            .|.|||      :|:.....||.    
  Rat   178 -----------YN---------NSGQ------------VGSGSTANQPIPRRVTGCLQNKV---- 206

  Fly   249 AFQFEEDVRQLAVGWTHNAAVLKNNEILVWGRNCYGQLGMGSFSEQQAIPTPLRLKLPEDQGPAR 313
                   |..:|.|...:.||:...|:.|||.|..||||:||...|   |||.|:...:.....|
  Rat   207 -------VMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQR 261

  Fly   314 IHMGAEHGLLRTTAGEVYTWGWNEHGNCGNNSTENLHPNSFTTATSEIVRRRSRIL 369
            :..|..|.|:.|..|::|.||.|.:|..|..:..|   .|:.|   .:|..:.||:
  Rat   262 VACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN---QSYPT---PVVVEKDRII 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7420NP_001259871.1 ATS1 3..348 CDD:444065 76/357 (21%)
Rcbtb2NP_954515.1 RCC1 1. /evidence=ECO:0000255 64..115 14/57 (25%)
ATS1 <71..335 CDD:444065 82/376 (22%)
RCC1 2. /evidence=ECO:0000255 117..169 15/107 (14%)
RCC1 3. /evidence=ECO:0000255 171..222 17/111 (15%)
RCC1 4. /evidence=ECO:0000255 223..274 20/53 (38%)
RCC1 5. /evidence=ECO:0000255 276..326 13/42 (31%)
RCC1 6. /evidence=ECO:0000255 328..382
BTB_POZ_RCBTB2_CHC1L 374..490 CDD:349663
BACK_RCBTB2 487..551 CDD:350604
Blue background indicates that the domain is not in the aligned region.

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