DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7420 and Herc2

DIOPT Version :10

Sequence 1:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_034548.2 Gene:Herc2 / 15204 MGIID:103234 Length:4836 Species:Mus musculus


Alignment Length:392 Identity:88/392 - (22%)
Similarity:152/392 - (38%) Gaps:104/392 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EVYAWGANSHGQLGLGFESELCMTPQRVAKCSFAPA----QVRLIRGGGGHVLILDTSGRIHACG 62
            :|:.||.|...||| |.:......|      ||:..    .|..:.||...:..:...|::::||
Mouse  2961 KVFVWGLNDKDQLG-GLKGSKIKVP------SFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 3018

  Fly    63 WNNRGQLGLDSTEECHSEFKMIPTEYFGDVPVE--------------TISCGWDISGAITLTKRL 113
            ....|:|||..:.              |.||:.              .:..|...:.|:|:..::
Mouse  3019 EATNGRLGLGMSS--------------GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

  Fly   114 FVWGSNAFQQLGICQRGFTAVRRPMPVKLPREEPAQRISFGLRHCAVLTQDNKIYV-----FGRL 173
            |.||.....:||...|  ....:|..::..:.:..:.|:.|..|.|.||...::|.     :|||
Mouse  3070 FSWGEGDDGKLGHFSR--MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3132

  Fly   174 RIMDPPPIELDITATCLHRCNTVKIQVHNPNELRIVSISSGQNHMVLKCAD-----LSETGGGST 233
            .                |..||.:::.      ::|.:..|...:.:.|..     |:.|..|  
Mouse  3133 G----------------HGDNTTQLKP------KMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173

  Fly   234 KRILTLGDNKFGQ-----SNAFQFEEDVR--------QLAVGWTHNAAVLKNNEILVWGRNCYGQ 285
             .:.:.||..||:     |......:::.        |:..|...:.|:.|:..:..||:..|.:
Mouse  3174 -LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

  Fly   286 LGMGSFSEQQAIPTPLRLKLPED----QGPARIH--MGAEHGLLRTTAGEVYTWGWNEHGNCGNN 344
            ||.||         .:.::.|:.    :|...:|  :||.|.|..|.:|:||.||.|:||..||.
Mouse  3238 LGHGS---------DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3293

  Fly   345 ST 346
            :|
Mouse  3294 TT 3295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7420NP_001259871.1 ATS1 3..348 CDD:444065 88/391 (23%)
Herc2NP_034548.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..90
RCC1 1-1 416..462
ATS1 456..776 CDD:444065
RCC1 1-2 463..513
RCC1 1-3 514..569
RCC1 1-4 570..621
RCC1 1-5 624..675
RCC1 1-6 676..727
RCC1 1-7 729..779
Cyt-b5 1212..1283 CDD:459698
MIB_HERC2 1871..1931 CDD:461991
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2351..2376
UBA_HERC2 2461..2508 CDD:270585
Cul7 2555..2632 CDD:463286
SH3_15 2640..2697 CDD:465720
ZZ_HERC2 2707..2751 CDD:239084
APC10-HERC2 2766..2911 CDD:176485
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2928..2947
RCC1 2-1 2959..3010 14/55 (25%)
ATS1 2962..3302 CDD:444065 88/391 (23%)
RCC1 2-2 3011..3065 12/67 (18%)
RCC1 2-3 3066..3117 12/52 (23%)
RCC1 2-4 3119..3169 11/71 (15%)
RCC1 2-5 3172..3223 9/53 (17%)
RCC1 2-6 3225..3275 14/58 (24%)
RCC1 2-7 3276..3327 11/20 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3479..3499
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3517..3537
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3604..3632
ATS1 3946..4294 CDD:444065
RCC1 3-1 3953..4004
RCC1 3-2 4006..4058
RCC1 3-3 4060..4110
RCC1 3-4 4112..4164
RCC1 3-5 4166..4216
RCC1 3-6 4218..4268
RCC1 3-7 4270..4320
HECTc 4423..4794 CDD:238033
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4806..4836
Blue background indicates that the domain is not in the aligned region.

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