DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31661 and Bace1

DIOPT Version :9

Sequence 1:NP_722707.1 Gene:CG31661 / 33330 FlyBaseID:FBgn0051661 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_035922.4 Gene:Bace1 / 23821 MGIID:1346542 Length:501 Species:Mus musculus


Alignment Length:411 Identity:96/411 - (23%)
Similarity:167/411 - (40%) Gaps:67/411 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IPHAHLHLQFRNALRRKYGFTP--LRTVNAVNVTSES----GKGVVITEPLINSYDTNFFGVVSV 94
            :|....||..|..||......|  ||.....:..||.    |..|.:.:.|.......::..::|
Mouse    17 LPAQGTHLGIRLPLRSGLAGPPLGLRLPRETDEESEEPGRRGSFVEMVDNLRGKSGQGYYVEMTV 81

  Fly    95 GD--QSFTMQFDTGSSDFWVPSSHCRFCIKTCGNKFFRKSNSKSFRSSGTPFSITYGSGSVKGIV 157
            |.  |:..:..|||||:|.|.::...|.     ::::::..|.::|.......:.|..|..:|.:
Mouse    82 GSPPQTLNILVDTGSSNFAVGAAPHPFL-----HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 141

  Fly   158 ASD--NVGFGDLKIQNQGIGLVNISD----SCSVFDGIAGFAFQQLSMTKS--VPSFQQMIDQQL 214
            .:|  ::..|........|..:..||    :.|.::||.|.|:.:::....  .|.|..::.|..
Mouse   142 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTH 206

  Fly   215 VEQPIFSFHL----------KSGSSDGGSMILGGSNSSLYYGPLTYTNVTEAKYWSFKLDFIAVH 269
            :.. |||..|          ::.:|.|||||:||.:.|||.|.|.||.:....|:...:..:.::
Mouse   207 IPN-IFSLQLCGAGFPLNQTEALASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEIN 270

  Fly   270 GKGSR---SSRTGNKAIMDTGTSLIVGP--VLEVLYINKDIGA--------------EHNKTYNL 315
            |:..:   .....:|:|:|:||:.:..|  |.|...  |.|.|              |....:..
Mouse   271 GQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAV--KSIKAASSTEKFPDGFWLGEQLVCWQA 333

  Fly   316 YTVACESIPQLPIIVFGIAGKEFF---VKPHTYV--------IRYDNFCFSAFMDMLGLQYWILG 369
            .|......|.:.:.:.|....:.|   :.|..|:        .:.|.:.|:......|.   ::|
Mouse   334 GTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAVSQSSTGT---VMG 395

  Fly   370 DAFMRENYVEFDWARRRMGIA 390
            ...|...||.||.||:|:|.|
Mouse   396 AVIMEGFYVVFDRARKRIGFA 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31661NP_722707.1 pepsin_retropepsin_like 78..391 CDD:299705 83/363 (23%)
Asp 88..392 CDD:278455 82/353 (23%)
Bace1NP_035922.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..58 4/18 (22%)
beta_secretase_like 72..437 CDD:133140 82/356 (23%)
Asp 75..416 CDD:278455 81/351 (23%)
Interaction with RTN3. /evidence=ECO:0000250 479..501
DXXLL. /evidence=ECO:0000250|UniProtKB:P56817 496..500
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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