DRSC/TRiP Functional Genomics Resources

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Protein Alignment NLaz and Rbp4

DIOPT Version :10

Sequence 1:NP_001259867.1 Gene:NLaz / 33324 FlyBaseID:FBgn0053126 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_037294.1 Gene:Rbp4 / 25703 RGDID:3546 Length:201 Species:Rattus norvegicus


Alignment Length:133 Identity:26/133 - (19%)
Similarity:50/133 - (37%) Gaps:51/133 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KLLDTFDAEAYMGVWYEYAAYPFAFEIGKK---------CIYANYSLIDNSTVSVVNAAINRFTG 92
            ::.:.||...:.|:||         .|.||         .|.|.:|:.:...:|           
  Rat    28 RVKENFDKARFSGLWY---------AIAKKDPEGLFLQDNIIAEFSVDEKGHMS----------- 72

  Fly    93 QPSNVTGQAKVLGPGQLAV----AFYPTQPLTK--------ANYL--------VLGTDYESYAVV 137
              :...|:.::|...::..    .|..|:...|        |::|        ::.|||:::|:.
  Rat    73 --ATAKGRVRLLSNWEVCADMVGTFTDTEDPAKFKMKYWGVASFLQRGNDDHWIIDTDYDTFALQ 135

  Fly   138 YSC 140
            |||
  Rat   136 YSC 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NLazNP_001259867.1 lipocalin_apoD-like 30..188 CDD:381212 26/133 (20%)
Rbp4NP_037294.1 lipocalin_RBP_like 22..192 CDD:381184 26/133 (20%)

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