DRSC/TRiP Functional Genomics Resources

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Protein Alignment NLaz and Apod

DIOPT Version :10

Sequence 1:NP_001259867.1 Gene:NLaz / 33324 FlyBaseID:FBgn0053126 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_038943926.1 Gene:Apod / 25239 RGDID:2137 Length:204 Species:Rattus norvegicus


Alignment Length:187 Identity:72/187 - (38%)
Similarity:99/187 - (52%) Gaps:7/187 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLLISVVFGAVWVAHAQVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYS 73
            :|||::.:.|.......|....||||...:.:.||.:.|:|.|||....|.:||.| .||.||||
  Rat    19 MLLLLATLAGLFTTTEGQSFHLGKCPSPPVQENFDVKKYLGRWYEIEKIPVSFEKG-NCIQANYS 82

  Fly    74 LIDNSTVSVVNAAINRFTGQPSNVTGQAK---VLGPGQLAVAFYPTQPLTKANYLVLGTDYESYA 135
            |::|..:.|:|..: |..|..:.|.|:||   :..|.:|.|.|:...|  .|.|.:|.|||||||
  Rat    83 LMENGNIKVLNKEL-RPDGTLNQVEGEAKQSNMSEPAKLEVQFFSLMP--PAPYWILATDYESYA 144

  Fly   136 VVYSCTSVTPLANFKIVWILTRQREPSAEAVDAARKILEDNDVSQAFLIDTVQKNCP 192
            :|||||:.....:...||||.|......|.:...:.||..||:..|.:..|.|.|||
  Rat   145 LVYSCTTFFWFFHVDYVWILGRNPYLPPETITYLKYILTSNDIDIAKITTTDQANCP 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NLazNP_001259867.1 lipocalin_apoD-like 30..188 CDD:381212 63/160 (39%)
ApodXP_038943926.1 lipocalin_apoD-like 40..197 CDD:381212 63/160 (39%)

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