DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5556 and ycjU

DIOPT Version :10

Sequence 1:NP_608595.2 Gene:CG5556 / 33320 FlyBaseID:FBgn0031332 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_415833.1 Gene:ycjU / 945891 ECOCYCID:G6655 Length:219 Species:Escherichia coli


Alignment Length:196 Identity:50/196 - (25%)
Similarity:78/196 - (39%) Gaps:44/196 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IFDLESAVFDTRHVYKRAVIELAA---------------------SYNKIIPEAVLIKSGPMETA 74
            ||||:..:.||.|::.:|..::||                     |..:|:....  |.|...:.
E. coli     7 IFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGG--KEGDFNSQ 69

  Fly    75 EMAELICRKCDLPVSWESFRFQLNERTSDLIANPTLMPGVERLVTHLGRCCMGLGLITSCSESMY 139
            |.|:|..||..|.|      ..|.|.|.:.:     :||:..|:..|....:.:||.:....:..
E. coli    70 ERAQLAYRKNLLYV------HSLRELTVNAV-----LPGIRSLLADLRAQQISVGLASVSLNAPT 123

  Fly   140 CTKIRDREDFFQNFSSVICADDADLKAPKPEPDVYLIAMRRLGDAGPDCTLVFDGTPKGVQAATD 204
            .....:..:||     ..|||.:.||..||:|:::|.|...||.....|..:.|     .||..|
E. coli   124 ILAALELREFF-----TFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIED-----AQAGID 178

  Fly   205 A 205
            |
E. coli   179 A 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5556NP_608595.2 Haloacid Dehalogenase-like Hydrolases 40..249 CDD:473868 46/187 (25%)
ycjUNP_415833.1 bPGM 5..191 CDD:213672 50/196 (26%)

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