DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5556 and AT4G39970

DIOPT Version :10

Sequence 1:NP_608595.2 Gene:CG5556 / 33320 FlyBaseID:FBgn0031332 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_568077.1 Gene:AT4G39970 / 830158 AraportID:AT4G39970 Length:316 Species:Arabidopsis thaliana


Alignment Length:266 Identity:54/266 - (20%)
Similarity:106/266 - (39%) Gaps:65/266 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PMCCSP--GISYCIFDLESAVFDTRHVYKRAV----------------------IELAASYNKII 60
            |:...|  .:...|||.:..:.::.:::::|.                      :|....:..::
plant    54 PVSALPLRSLEALIFDCDGVILESENLHRQAYNDAFSHFDVRCPPSSSESLDWSLEFYDKFQNLV 118

  Fly    61 ----------------PEAVLIKSGPMETAEMAELICRKCDLPVSWESFRFQLNERTSDLIANPT 109
                            |.:.:..|.|....:.|:||    |....|::      ||..::|.:.:
plant   119 GGGKPKMRWYFKENGWPTSTIFDSPPQNDDDRAKLI----DTLQDWKT------ERYKEIIKSGS 173

  Fly   110 L--MPGVERLVTHLGRCCMGLGLITSCSESMYCTKIRDREDF--FQNFSSVICADDADLKAPKPE 170
            :  .|||.||:.........|.:.::.::|.....:.:..|.  ||.....:..|  |:|..||:
plant   174 VEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVILCLENLIDIERFQGLDCFLAGD--DVKEKKPD 236

  Fly   171 PDVYLIAMRRLGDAGPDCTLVFDGTPKGVQAATDARLPVVMLAE--------KDLPCCWSELATL 227
            |.:|:.|..:||.:..|| ||.:.:..|:||||.|.:..|:...        .|....:.:|:.:
plant   237 PSIYITAAEKLGVSVKDC-LVVEDSVIGLQAATKAGMSCVITYTSSTSDQNFNDAIAVYPDLSNV 300

  Fly   228 RLETLE 233
            :|:.||
plant   301 KLKDLE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5556NP_608595.2 Haloacid Dehalogenase-like Hydrolases 40..249 CDD:473868 49/244 (20%)
AT4G39970NP_568077.1 PLN02779 29..316 CDD:215416 54/266 (20%)

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