DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5556 and AT3G10970

DIOPT Version :10

Sequence 1:NP_608595.2 Gene:CG5556 / 33320 FlyBaseID:FBgn0031332 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_566385.1 Gene:AT3G10970 / 820268 AraportID:AT3G10970 Length:365 Species:Arabidopsis thaliana


Alignment Length:258 Identity:57/258 - (22%)
Similarity:93/258 - (36%) Gaps:57/258 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IFDLESAVFDTRHVYKRAVIELAASYNKIIPEAV-----LIKSGPMETAEMAELICRKCDLPVSW 90
            ||..::.|.|||.:...|..:|||...|.|.|.|     ::.:|       |:.:.||.   :.|
plant   126 IFSWDNVVADTRSLKLEAWKQLAAEEGKEITEEVDIQRLMLYAG-------ADHVLRKV---LFW 180

  Fly    91 ES-------FRFQLNERTSDLIANPT-----LMPGVERLVTHLGRCCMGLGLITSCSESMYCTKI 143
            |.       .:.:|:|...|.:...|     |...::.:.|....|.     :.|..:.......
plant   181 EKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLRDWLDAVTTARIPCA-----VVSNLDRKNMINA 240

  Fly   144 RDREDFFQNFSSVICADDADLKAPKPEPDVYLIAMRRLG-----DAGPDCTLVFDGTPKGVQAAT 203
            .:|....:.|.:|:..:|.          :..||.|.|.     |..|...:||:..|:|:.||.
plant   241 LERMGLQKYFQAVVSEEDG----------MESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAH 295

  Fly   204 DARLPVV---------MLAEKDLPC-CWSELATLRLETLEEFDPAEFNMPPYSCTEPPPKKPK 256
            :..:..|         .|.:.||.. .:.||:.:.|..|.....:.|........|..|.|.|
plant   296 NCTMMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKRK 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5556NP_608595.2 Haloacid Dehalogenase-like Hydrolases 40..249 CDD:473868 50/240 (21%)
AT3G10970NP_566385.1 YcjU 124..326 CDD:440402 48/224 (21%)

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