DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5556 and Pudp

DIOPT Version :10

Sequence 1:NP_608595.2 Gene:CG5556 / 33320 FlyBaseID:FBgn0031332 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_080384.2 Gene:Pudp / 67365 MGIID:1914615 Length:234 Species:Mus musculus


Alignment Length:226 Identity:65/226 - (28%)
Similarity:107/226 - (47%) Gaps:11/226 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ISYCIFDLESAVFDTRHVYKRAVIEL----AASYNKIIPEAVLIKSGPMETAEMAELICRKCDLP 87
            :::.||||:..:.:|..:|.....|:    ...||..:...|:.|    :..|.|:.|....:||
Mouse    13 VTHLIFDLDGLILNTEDLYTDVFEEICNRYGKKYNWDVKSLVMGK----KALETAQTIVEFLNLP 73

  Fly    88 VSWESFRFQLNERTSDLIANPTLMPGVERLVTHLGRCCMGLGLITSCSESMYCTKIRDREDFFQN 152
            :|.|....:..|:...::.....|||.|.|:.||.:..:...|.||.....:.||......||..
Mouse    74 ISKEELLKESQEKLQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGFFGL 138

  Fly   153 FSSVICADDADLKAPKPEPDVYLIAMRRLGDA--GPDCTLVFDGTPKGVQAATDARLPVVMLAEK 215
            |..::..||.::|..||..|::|...:|....  ..|| |||:.:|.||:||....:.|||:..:
Mouse   139 FHHIVLGDDPEVKNGKPGMDIFLTCAKRFSPPPDPKDC-LVFEDSPNGVEAAIHCGMQVVMVPHE 202

  Fly   216 DLPCCWSELATLRLETLEEFDPAEFNMPPYS 246
            :|....:..|||.|.:|.:|.|..|.:|.::
Mouse   203 NLSADLTRKATLVLSSLHDFKPELFGLPAFT 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5556NP_608595.2 Haloacid Dehalogenase-like Hydrolases 40..249 CDD:473868 61/213 (29%)
PudpNP_080384.2 HAD_AtGPP-like 13..201 CDD:319831 55/192 (29%)

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