DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5556 and CG5565

DIOPT Version :10

Sequence 1:NP_608595.2 Gene:CG5556 / 33320 FlyBaseID:FBgn0031332 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_608598.1 Gene:CG5565 / 33323 FlyBaseID:FBgn0031335 Length:240 Species:Drosophila melanogaster


Alignment Length:236 Identity:62/236 - (26%)
Similarity:109/236 - (46%) Gaps:6/236 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PPMCCSPGISYCIFDLESAVFDTRHVYKRAVIELAASYNKIIPEAVLIKSGPMETAEMAELICRK 83
            |...|...:::.|||.:..:.|:..:|.:.|.:|.|.|.|...:....:...|.....::.|.:.
  Fly     2 PTKKCYCPVTHVIFDCDGTLIDSEGIYLKTVQDLLAKYGKTYTKVDQTQHMGMPVGTFSQHIVKD 66

  Fly    84 CDLPVSWESFRFQLNERTSDLIANPTLMPGVERLVTHLGRCCMGLGLITSCSESMYCTKIRDRED 148
            ..||:|...|:.:........:.:..|:|||..|:.||....:...:.||....::..|....:|
  Fly    67 LKLPLSPAEFQKEFEAAVDKSMGSVALLPGVRDLILHLHEYRIPFCIATSSFRKLFKVKAESFKD 131

  Fly   149 FFQNFSSVICADDADLKAP---KPEPDVYLIAMRRLG-DAGPDCTLVFDGTPKGVQAATDARLPV 209
            .|..|..|:|.||..| .|   ||.||:||:|..|.. .|.|...|:|:..|.|:.....|...|
  Fly   132 IFLAFHHVVCGDDPAL-GPGRGKPYPDIYLLAASRFNPPADPKKCLIFEDAPVGLIGGKAAGSQV 195

  Fly   210 VMLAEKDLPCCWSELATLRLETLEEFDPAEFNMPPY-SCTE 249
            :.:...::.....:.||:.|:::.:|.|..|.:||: :|::
  Fly   196 IFIPTDNVSKQQKKGATMVLKSMADFKPELFGLPPFDTCSK 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5556NP_608595.2 Haloacid Dehalogenase-like Hydrolases 40..249 CDD:473868 57/213 (27%)
CG5565NP_608598.1 HAD_AtGPP-like 10..200 CDD:319831 51/190 (27%)

Return to query results.
Submit another query.