DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdlc2 and vti1b

DIOPT Version :10

Sequence 1:	NP_477408.1	Gene:	Cdlc2 / 33319	FlyBaseID:	FBgn0026141	Length:	89	Species:	Drosophila melanogaster
Sequence 2:	NP_001016960.1	Gene:	vti1b / 549714	XenbaseID:	XB-GENE-957754	Length:	221	Species:	Xenopus tropicalis

Alignment Length:	22	Identity:	6/22 - (27%)
Similarity:	14/22 - (63%)	Gaps:	0/22 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 EMQQDAVDCATQALEKYNIEKD 37
            |...:|::.:|:..|.|::|.:
Frog    88 EANYNALEVSTKERETYSVENE 109

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Cdlc2	NP_477408.1	DLC-like_DYNLL1_DYNLL2	5..88	CDD:412000	6/22 (27%)
vti1b	NP_001016960.1	V-SNARE	13..88	CDD:461516	6/22 (27%)
vti1b	NP_001016960.1	SNARE_Vti1b	125..186	CDD:277243
Blue background indicates that the domain is not in the aligned region.

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