DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and ube2a

DIOPT Version :10

Sequence 1:NP_608594.2 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_958430.1 Gene:ube2a / 797853 ZFINID:ZDB-GENE-030616-72 Length:152 Species:Danio rerio


Alignment Length:139 Identity:55/139 - (39%)
Similarity:82/139 - (58%) Gaps:0/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SNSAVKRIQKELDEITRDPPQYCSAGPKEDNLYEWTSTIIGPADSVYENGIFKLDIFFPVEYPFA 83
            |..|.:|:.::...:..|||...|..|.|:|:..|.:.|.||..:.:|:|.|||.|.|..|||..
Zfish     2 STPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNK 66

  Fly    84 PPVVIFRTPIYHCNIHRLGFICLDILKEKWSPALTISKILLSICSLLTDCNPKDPLMAKIGTEYL 148
            ||.|.|.:.::|.|::..|.||||||:.:|||...:|.||.||.|||.:.||..|..::....|.
Zfish    67 PPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQ 131

  Fly   149 KNRAEHDKK 157
            :|:.|::|:
Zfish   132 ENKREYEKR 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_608594.2 UBCc_UBE2E 24..164 CDD:467413 53/134 (40%)
ube2aNP_958430.1 UBCc_UBE2A_2B 3..145 CDD:467410 54/138 (39%)

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