DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and Ube2d2

DIOPT Version :9

Sequence 1:NP_001285558.1 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_001380701.1 Gene:Ube2d2 / 641452 RGDID:1591897 Length:147 Species:Rattus norvegicus


Alignment Length:145 Identity:83/145 - (57%)
Similarity:108/145 - (74%) Gaps:0/145 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AVKRIQKELDEITRDPPQYCSAGPKEDNLYEWTSTIIGPADSVYENGIFKLDIFFPVEYPFAPPV 86
            |:|||.|||:::.||||..|||||..|:::.|.:||:||.||.|:.|:|.|.|.||.:|||.||.
  Rat     2 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPK 66

  Fly    87 VIFRTPIYHCNIHRLGFICLDILKEKWSPALTISKILLSICSLLTDCNPKDPLMAKIGTEYLKNR 151
            |.|.|.|||.||:..|.||||||:.:|||||||||:||||||||.|.||.|||:.:|...|..:|
  Rat    67 VAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 131

  Fly   152 AEHDKKARLWTKRYA 166
            .::::.||.||::||
  Rat   132 EKYNRIAREWTQKYA 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_001285558.1 COG5078 19..168 CDD:227410 83/145 (57%)
UQ_con 25..162 CDD:278603 77/136 (57%)
Ube2d2NP_001380701.1 UBCc 1..146 CDD:412187 81/143 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53976
OrthoDB 1 1.010 - - D1337945at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.930

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