DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and ube2l3a

DIOPT Version :10

Sequence 1:NP_608594.2 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_001002072.1 Gene:ube2l3a / 415162 ZFINID:ZDB-GENE-030131-2977 Length:154 Species:Danio rerio


Alignment Length:156 Identity:56/156 - (35%)
Similarity:87/156 - (55%) Gaps:17/156 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SAVKRIQKELDEITRDPPQYCSAGPK--------EDNLYEWTSTIIGPADSVYENGIFKLDIFFP 77
            :|.:|:.||||||.:       :|.|        |.|:..|...|: |.:..|:.|.|:::|.||
Zfish     2 AASRRLHKELDEIRK-------SGMKNFRNIQVDESNILTWQGLIV-PDNPPYDKGAFRIEITFP 58

  Fly    78 VEYPFAPPVVIFRTPIYHCNIHRLGFICLDILK-EKWSPALTISKILLSICSLLTDCNPKDPLMA 141
            .||||.||.:.|:|.|||.||...|.:||.::. |.|.||....:::.|:.:|:.|..|:.||.|
Zfish    59 AEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRA 123

  Fly   142 KIGTEYLKNRAEHDKKARLWTKRYAK 167
            .:..||.|:|.:..|.|..:||::.:
Zfish   124 DLAEEYSKDRKKFFKNAEEFTKKHGE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_608594.2 UBCc_UBE2E 24..164 CDD:467413 54/148 (36%)
ube2l3aNP_001002072.1 UBCc_UBE2L3 3..149 CDD:467421 56/153 (37%)

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