DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and ube2l3a

DIOPT Version :9

Sequence 1:NP_001285558.1 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_001002072.1 Gene:ube2l3a / 415162 ZFINID:ZDB-GENE-030131-2977 Length:154 Species:Danio rerio


Alignment Length:156 Identity:56/156 - (35%)
Similarity:87/156 - (55%) Gaps:17/156 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SAVKRIQKELDEITRDPPQYCSAGPK--------EDNLYEWTSTIIGPADSVYENGIFKLDIFFP 77
            :|.:|:.||||||.:       :|.|        |.|:..|...|: |.:..|:.|.|:::|.||
Zfish     2 AASRRLHKELDEIRK-------SGMKNFRNIQVDESNILTWQGLIV-PDNPPYDKGAFRIEITFP 58

  Fly    78 VEYPFAPPVVIFRTPIYHCNIHRLGFICLDILK-EKWSPALTISKILLSICSLLTDCNPKDPLMA 141
            .||||.||.:.|:|.|||.||...|.:||.::. |.|.||....:::.|:.:|:.|..|:.||.|
Zfish    59 AEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRA 123

  Fly   142 KIGTEYLKNRAEHDKKARLWTKRYAK 167
            .:..||.|:|.:..|.|..:||::.:
Zfish   124 DLAEEYSKDRKKFFKNAEEFTKKHGE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_001285558.1 COG5078 19..168 CDD:227410 56/156 (36%)
UQ_con 25..162 CDD:278603 53/145 (37%)
ube2l3aNP_001002072.1 UQ_con 6..144 CDD:306648 53/145 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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