DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and ube2na

DIOPT Version :10

Sequence 1:NP_608594.2 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_998651.1 Gene:ube2na / 406807 ZFINID:ZDB-GENE-040426-2873 Length:154 Species:Danio rerio


Alignment Length:143 Identity:68/143 - (47%)
Similarity:87/143 - (60%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KRIQKELDEITRDPPQYCSAGPKEDNLYEWTSTIIGPADSVYENGIFKLDIFFPVEYPFAPPVVI 88
            :||.||...:..:|.....|.|.|.|...:...|.||.||.:|.|.|||::|.|.|||.|.|.|.
Zfish     6 RRIIKETQRLLAEPVPGIKAEPDEGNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVR 70

  Fly    89 FRTPIYHCNIHRLGFICLDILKEKWSPALTISKILLSICSLLTDCNPKDPLMAKIGTEYLKNRAE 153
            |.|.|||.|:.:||.|||||||:||||||.|..:||||.:||:..||.|||...:..::..|.|:
Zfish    71 FMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ 135

  Fly   154 HDKKARLWTKRYA 166
            ..:.||.||:.||
Zfish   136 AIETARTWTRLYA 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_608594.2 UBCc_UBE2E 24..164 CDD:467413 66/139 (47%)
ube2naNP_998651.1 UBCc_UBE2N 4..147 CDD:467433 66/140 (47%)

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