DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and ube2d1a

DIOPT Version :10

Sequence 1:NP_608594.2 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_957404.1 Gene:ube2d1a / 394085 ZFINID:ZDB-GENE-040426-1609 Length:147 Species:Danio rerio


Alignment Length:145 Identity:82/145 - (56%)
Similarity:107/145 - (73%) Gaps:0/145 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AVKRIQKELDEITRDPPQYCSAGPKEDNLYEWTSTIIGPADSVYENGIFKLDIFFPVEYPFAPPV 86
            |:|||||||.::.||||..|||||..::|:.|.:||:||.||.|:.|:|.|.|.||.:|||.||.
Zfish     2 ALKRIQKELQDLQRDPPSQCSAGPLGEDLFHWQATIMGPGDSPYQGGVFFLTIHFPTDYPFKPPK 66

  Fly    87 VIFRTPIYHCNIHRLGFICLDILKEKWSPALTISKILLSICSLLTDCNPKDPLMAKIGTEYLKNR 151
            |.|.|.|||.||:..|.||||||:.:||||||:||:||||||||.|.||.|||:..|...|..::
Zfish    67 VAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAHIYKSDK 131

  Fly   152 AEHDKKARLWTKRYA 166
            .::::.||.||::||
Zfish   132 DKYNRLAREWTQKYA 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_608594.2 UBCc_UBE2E 24..164 CDD:467413 79/139 (57%)
ube2d1aNP_957404.1 UBCc_UBE2D 3..145 CDD:467412 79/141 (56%)

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