DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and ube2nb

DIOPT Version :9

Sequence 1:NP_001285558.1 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_956636.1 Gene:ube2nb / 393313 ZFINID:ZDB-GENE-040426-1291 Length:154 Species:Danio rerio


Alignment Length:143 Identity:68/143 - (47%)
Similarity:87/143 - (60%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KRIQKELDEITRDPPQYCSAGPKEDNLYEWTSTIIGPADSVYENGIFKLDIFFPVEYPFAPPVVI 88
            :||.||...:..:|.....|.|.|.|...:...|.||.||.:|.|.|||::|.|.|||.|.|.|.
Zfish     6 RRIIKETQRLLAEPVPGIKAEPDEGNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVR 70

  Fly    89 FRTPIYHCNIHRLGFICLDILKEKWSPALTISKILLSICSLLTDCNPKDPLMAKIGTEYLKNRAE 153
            |.|.|||.|:.:||.|||||||:||||||.|..:||||.:||:..||.|||...:..::..|.|:
Zfish    71 FMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQ 135

  Fly   154 HDKKARLWTKRYA 166
            ..:.||.||:.||
Zfish   136 AIETARTWTRLYA 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_001285558.1 COG5078 19..168 CDD:227410 68/143 (48%)
UQ_con 25..162 CDD:278603 64/136 (47%)
ube2nbNP_956636.1 UBCc 4..151 CDD:412187 68/143 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53976
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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