DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and CG17030

DIOPT Version :9

Sequence 1:NP_001285558.1 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster


Alignment Length:147 Identity:43/147 - (29%)
Similarity:81/147 - (55%) Gaps:4/147 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KRIQKELDEITRDPP--QYCSAGPKEDNLYEWTSTIIGPADSVYENGIFKLDIFFPVEYPFAPPV 86
            ||:.:||..:..|..  |:.:...:.:|:|:||..:: |....|:.|.:|::|.||::|||.||.
  Fly    13 KRMNRELALMLEDKQNLQFRNLLVEPNNIYKWTGLLM-PVAPPYDKGAYKMEIDFPLDYPFKPPR 76

  Fly    87 VIFRTPIYHCNIHRLGFICLDILK-EKWSPALTISKILLSICSLLTDCNPKDPLMAKIGTEYLKN 150
            :...|.:||.|::..|.:|:.||: |.|.|...|.::|..:.:.:.|..|::....::..||..:
  Fly    77 IHINTRMYHLNVNERGQVCVPILEVEHWIPTTRIDQVLQVLLATINDPQPENAWHIEMAGEYRND 141

  Fly   151 RAEHDKKARLWTKRYAK 167
            .....|.|..|.::|::
  Fly   142 PVRFFKMADAWVQKYSE 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_001285558.1 COG5078 19..168 CDD:227410 43/147 (29%)
UQ_con 25..162 CDD:278603 40/139 (29%)
CG17030NP_647941.1 COG5078 12..158 CDD:227410 43/145 (30%)
UQ_con 14..153 CDD:278603 40/139 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442230
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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