DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and Ubc10

DIOPT Version :10

Sequence 1:NP_608594.2 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_477414.1 Gene:Ubc10 / 37035 FlyBaseID:FBgn0026316 Length:154 Species:Drosophila melanogaster


Alignment Length:149 Identity:53/149 - (35%)
Similarity:88/149 - (59%) Gaps:3/149 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SAVKRIQKELDEITRDP-PQYCSAGPKEDNLYEWTSTIIGPADSVYENGIFKLDIFFPVEYPFAP 84
            :|.:|::|||.::..:. ..:......:|||..||..|: |.:..|..|.|:::|.||.||||.|
  Fly     2 TAPRRLRKELSDLQGNALKSFRDIKADDDNLLRWTGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 65

  Fly    85 PVVIFRTPIYHCNIHRLGFICLDILK-EKWSPALTISKILLSICSLLTDCNPKDPLMAKIGTEYL 148
            |.:.|:|.|||.||...|.:||.|:. |.|.||....:::.::..|:.|..|:.||.|::..|:|
  Fly    66 PKINFKTRIYHPNIDEKGQVCLPIISTENWKPATRTDQVVQALVDLINDPEPEHPLRAELAEEFL 130

  Fly   149 KNRAEHDKKARLWTKRYAK 167
            |:|.:..|.|..:||::::
  Fly   131 KDRKKFVKNAEDYTKKHSE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_608594.2 UBCc_UBE2E 24..164 CDD:467413 51/141 (36%)
Ubc10NP_477414.1 UBCc_UBE2L3 3..149 CDD:467421 53/146 (36%)

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