DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and Ubc2

DIOPT Version :10

Sequence 1:NP_608594.2 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster


Alignment Length:156 Identity:112/156 - (71%)
Similarity:121/156 - (77%) Gaps:1/156 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TPSCSWTCSNSAVKRIQKELDEITRDPPQYCSAGPKEDNLYEWTSTIIGPADSVYENGIFKLDIF 75
            ||..|.....|| |||||||.|||.|||..||||||.||||||.|||:||..||||.|:|.|||.
  Fly    77 TPRISRALGTSA-KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIH 140

  Fly    76 FPVEYPFAPPVVIFRTPIYHCNIHRLGFICLDILKEKWSPALTISKILLSICSLLTDCNPKDPLM 140
            |..||||.||.|.|||.||||||:..|.|||||||:.|||||||||:|||||||||||||.|||:
  Fly   141 FSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 205

  Fly   141 AKIGTEYLKNRAEHDKKARLWTKRYA 166
            ..|.|:||:||.|||:.|||||||||
  Fly   206 GSIATQYLQNREEHDRIARLWTKRYA 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_608594.2 UBCc_UBE2E 24..164 CDD:467413 103/139 (74%)
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 55/81 (68%)
UBCc_UBE2E 89..229 CDD:467413 103/139 (74%)

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