DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5440 and ube2d4

DIOPT Version :9

Sequence 1:NP_001285558.1 Gene:CG5440 / 33318 FlyBaseID:FBgn0031331 Length:169 Species:Drosophila melanogaster
Sequence 2:XP_012814892.1 Gene:ube2d4 / 100497147 XenbaseID:XB-GENE-962537 Length:159 Species:Xenopus tropicalis


Alignment Length:138 Identity:76/138 - (55%)
Similarity:101/138 - (73%) Gaps:0/138 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ELDEITRDPPQYCSAGPKEDNLYEWTSTIIGPADSVYENGIFKLDIFFPVEYPFAPPVVIFRTPI 93
            ||.::.||||..|||||..::|:.|.:||:||.||.::.|:|.|.|.||.:|||.||.|.|.|.|
 Frog    21 ELMDLQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPFKPPKVAFTTKI 85

  Fly    94 YHCNIHRLGFICLDILKEKWSPALTISKILLSICSLLTDCNPKDPLMAKIGTEYLKNRAEHDKKA 158
            ||.||:..|.||||||:.:||||||:||:||||||||.|.||.|||:.:|...|..:|.::::.|
 Frog    86 YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLA 150

  Fly   159 RLWTKRYA 166
            |.||::||
 Frog   151 REWTQKYA 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5440NP_001285558.1 COG5078 19..168 CDD:227410 76/138 (55%)
UQ_con 25..162 CDD:278603 72/132 (55%)
ube2d4XP_012814892.1 COG5078 21..159 CDD:227410 76/138 (55%)
UBCc 21..158 CDD:294101 74/136 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53976
OrthoDB 1 1.010 - - D1337945at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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