DRSC/TRiP Functional Genomics Resources

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Protein Alignment a5 and ATC

DIOPT Version :10

Sequence 1:NP_476998.1 Gene:a5 / 33317 FlyBaseID:FBgn0011294 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_180324.1 Gene:ATC / 817302 AraportID:AT2G27550 Length:175 Species:Arabidopsis thaliana


Alignment Length:159 Identity:42/159 - (26%)
Similarity:82/159 - (51%) Gaps:11/159 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VIPEILDEPPREL-LRIKYDNTIDIEEGKTYTPTELKFQPRLD-WNADPESFYTVLMICPDAPNR 97
            ||.:::|...:.: :.:.|::...:..|....|:.:.::|::: ...|..||:|::|..||.|..
plant    14 VIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFFTLVMTDPDVPGP 78

  Fly    98 ENPMYRSWLHWLVVNVPG-LDIMKGQPISEYFGPLPPKDSGIQRYLILVYQQSDKLDFDEKKMEL 161
            .:|..|..|||:|.::|| .|:..|:.|..|..|.|  :.||.|::.|:::|:      .:...:
plant    79 SDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRP--NIGIHRFVYLLFKQT------RRGSVV 135

  Fly   162 SNADGHSNFDVMKFTQKYEMGSPVAGNIF 190
            |.......|:..:|..:.::|.|||...|
plant   136 SVPSYRDQFNTREFAHENDLGLPVAAVFF 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
a5NP_476998.1 PEBP_euk 47..192 CDD:176644 39/147 (27%)
ATCNP_180324.1 PEBP 7..175 CDD:469671 42/159 (26%)

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