DRSC/TRiP Functional Genomics Resources

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Protein Alignment a5 and Mrpl38

DIOPT Version :9

Sequence 1:NP_476998.1 Gene:a5 / 33317 FlyBaseID:FBgn0011294 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_077139.2 Gene:Mrpl38 / 60441 MGIID:1926269 Length:380 Species:Mus musculus


Alignment Length:176 Identity:50/176 - (28%)
Similarity:78/176 - (44%) Gaps:22/176 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LRIKY----DNTIDIEEGKTYTPTELKFQPRLDWNADPESFYTVLMICPDA----PNRENPMYRS 104
            |.:.|    ::.|.:..|...||||....|.:.:.||.:|.:|:|.|..|.    |:.|      
Mouse   173 LHVAYAVGEEDLIPVYHGNEVTPTEASRAPEVTYEADKDSLWTLLFINLDGHLLEPDAE------ 231

  Fly   105 WLHWLVVNVPGLDIMKGQPISEYFGPLPPKDSGIQRYLILVYQQSDKLDFDEKK-----MELSNA 164
            ::|||:.|:|...:.:||....|..|.|.:.||..|:..|:::|...::|.|..     .:|:..
Mouse   232 YVHWLLTNIPSNRVAEGQETCPYLPPFPARGSGFHRFAFLLFKQDKPINFSEDTRPSPCYQLAQR 296

  Fly   165 DGHSNFDVMKFTQKYEMGSPVAGNIFQSRWDEYVPELMKTLYGVSE 210
            . ...||..|..|  |..:|.....||.|||:.|......|..:.|
Mouse   297 T-FRTFDFYKRHQ--EAMTPAGLAFFQCRWDDSVTHTFHQLLDMRE 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
a5NP_476998.1 PEBP_euk 47..192 CDD:176644 43/156 (28%)
Mrpl38NP_077139.2 PEBP_euk 171..321 CDD:176644 43/156 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1881
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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