DRSC/TRiP Functional Genomics Resources

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Protein Alignment a5 and mrpl38

DIOPT Version :9

Sequence 1:NP_476998.1 Gene:a5 / 33317 FlyBaseID:FBgn0011294 Length:210 Species:Drosophila melanogaster
Sequence 2:XP_005169545.1 Gene:mrpl38 / 405881 ZFINID:ZDB-GENE-040426-2373 Length:386 Species:Danio rerio


Alignment Length:193 Identity:49/193 - (25%)
Similarity:98/193 - (50%) Gaps:11/193 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VRRIMKEMEVIPEILDE---PPRELLRIKY--DNTIDIEEGKTYTPTELKFQPRLDWNADPESFY 85
            :||:.:...:..::...   .||.:|||.|  |::..:..|...||::.:..|.:.:.|:.:|.:
Zfish   156 IRRLAEHYGIYKDLFPMAYFTPRVMLRIGYGDDSSAAVHYGNHLTPSQAEQAPHVHYEAEEDSLW 220

  Fly    86 TVLMICPDAPNRENPMYRSWLHWLVVNVPGLDIMKGQPISEYFGPLPPKDSGIQRYLILVYQQSD 150
            |:|:..||....:..  :.:|||||.|:||..:..|..|..|..|.|.:.:|:.|::.::::|..
Zfish   221 TLLLTSPDEHLLDEE--QEYLHWLVGNIPGRAVASGDQICPYLCPFPARGTGLHRFIFILFKQDA 283

  Fly   151 KLDF--DEKKMELSNADGHSNFDVMKFTQKY-EMGSPVAGNIFQSRWDEYVPELMKTLYGVSE 210
            .:||  |.:.:...:....| |..:.|.:|: ::.:|.....||.:||:.|.:....:..:.|
Zfish   284 LVDFGSDVRPVPCESLKRRS-FQTLDFYRKHQDLITPAGLAFFQCQWDQSVTQTFHNILKMKE 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
a5NP_476998.1 PEBP_euk 47..192 CDD:176644 40/149 (27%)
mrpl38XP_005169545.1 PEBP_euk 179..327 CDD:176644 40/150 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1881
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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