DRSC/TRiP Functional Genomics Resources

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Protein Alignment a5 and Pbp2

DIOPT Version :9

Sequence 1:NP_476998.1 Gene:a5 / 33317 FlyBaseID:FBgn0011294 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_001099226.1 Gene:Pbp2 / 246145 RGDID:621707 Length:187 Species:Rattus norvegicus


Alignment Length:170 Identity:73/170 - (42%)
Similarity:105/170 - (61%) Gaps:2/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LDEPPRELLRIKYDNTIDIEEGKTYTPTELKFQP-RLDWNA-DPESFYTVLMICPDAPNRENPMY 102
            :||.|:.|||:.|......|.|:..|||::|.:| .:.|:. ||...||:::..||||:|:.|:|
  Rat    17 VDEQPQHLLRVTYAGAEVSELGQVLTPTQVKNRPSSITWDGLDPGKLYTLILTDPDAPSRKEPIY 81

  Fly   103 RSWLHWLVVNVPGLDIMKGQPISEYFGPLPPKDSGIQRYLILVYQQSDKLDFDEKKMELSNADGH 167
            |.|.|:||||:.|.||..|:.:|:|.|..|||.:|:.||:.|||||...|..||..:...:.:..
  Rat    82 REWHHFLVVNMKGNDISSGKVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLKCDEPILTNRSGNQR 146

  Fly   168 SNFDVMKFTQKYEMGSPVAGNIFQSRWDEYVPELMKTLYG 207
            ..|....|.:||.:|:||||..:|:.||.|||:|.|.|.|
  Rat   147 GKFKAAAFRKKYHLGAPVAGTCYQAEWDSYVPKLYKQLSG 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
a5NP_476998.1 PEBP_euk 47..192 CDD:176644 60/146 (41%)
Pbp2NP_001099226.1 PEBP_euk 23..171 CDD:176644 60/147 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343223
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1881
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55789
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 1 1.000 - - FOG0000438
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X275
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.760

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