DRSC/TRiP Functional Genomics Resources

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Protein Alignment a5 and Pebp1

DIOPT Version :9

Sequence 1:NP_476998.1 Gene:a5 / 33317 FlyBaseID:FBgn0011294 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_061346.2 Gene:Pebp1 / 23980 MGIID:1344408 Length:187 Species:Mus musculus


Alignment Length:171 Identity:73/171 - (42%)
Similarity:107/171 - (62%) Gaps:4/171 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LDEPPRELLRIKYDN-TIDIEEGKTYTPTELKFQP-RLDWNA-DPESFYTVLMICPDAPNRENPM 101
            :||||:..||:.|.. |:| |.||..|||::..:| .:.|:. ||...||:::..||||:|::|.
Mouse    17 VDEPPQHALRVDYAGVTVD-ELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPK 80

  Fly   102 YRSWLHWLVVNVPGLDIMKGQPISEYFGPLPPKDSGIQRYLILVYQQSDKLDFDEKKMELSNADG 166
            :|.|.|:||||:.|.||..|..:|:|.|..||..:|:.||:.|||:|...|..||..:...:.|.
Mouse    81 FREWHHFLVVNMKGNDISSGTVLSDYVGSGPPSGTGLHRYVWLVYEQEQPLSCDEPILSNKSGDN 145

  Fly   167 HSNFDVMKFTQKYEMGSPVAGNIFQSRWDEYVPELMKTLYG 207
            ...|.|..|.:||.:|:||||..:|:.||:|||:|.:.|.|
Mouse   146 RGKFKVETFRKKYNLGAPVAGTCYQAEWDDYVPKLYEQLSG 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
a5NP_476998.1 PEBP_euk 47..192 CDD:176644 60/147 (41%)
Pebp1NP_061346.2 PEBP_euk 25..171 CDD:176644 60/146 (41%)
Interaction with RAF1. /evidence=ECO:0000250 93..134 17/40 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1881
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55789
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000438
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X275
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.780

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